| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4058 |
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| Symbol | |
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| ID | 5664442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4931239 |
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| End bp | 4932858 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238722 |
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| Product | AbgT putative transporter |
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| Protein accession | YP_001503903 |
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| Protein GI | 157963869 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000746135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ATAACGGAGA TCGCCTGCAT CAGTCAGGCG GTGCCTCTTT AGATCCTAAT
AATCAAGTCA GTGGTTGGTT TGTTCGTTTC CTCAACATCG TAGAAAGGCT CGGAAACCTG
TTACCTCACC CAATTACGCT ATTTGCAATT TTTTGTGCCG CCGTTGTCGT TATCAGTGGC
ATAGCCGGCT ATTTTGAATT AAGTGTTGTC GACCCTAGAC CCGAAGGTGC AGCGGGGCGC
AGCAGTGACG GTATGATCCA TGTTGTCAGC CTGATGAATG CTGAAGGCCT GCGGATGATA
GTCTCCAACT TAGTCACTAA CTTCACCGGC TTTACTCCGC TAGGAACGGT ACTTGTCGCC
TTACTTGGTG TCGGTATTGC TGAGCGTTCA GGATTGCTAT CAGCAGCAAT GCGCTCACTG
GTTATGGGAA CATCGAAGCG TTTAGTGACT CTCACTATCG TGTTTGCAGG TATCGTTTCA
AATACTGCTG CGGAGCTTGG ATACGTAGTA CTTATCCCTA TGGCGGCGAT GATTTTCCAT
TCGCTAGGTC GTCATCCGCT TGCAGGACTC GCGGCAGCTT TTGCTGGTGT GTCTGGTGGC
TACAGCGCAA ACTTGCTATT AGGCACAGTC GACCCATTAT TATCAGGGAT AACCGAAGCC
GCTGCGCAAA TGATTGACCC AGACTACACA GTTGGCCCAG AAGCAAACTG GTACTTTATG
TTTGCATCCA CCTTCATCAT TACCTTTTTA GGCGCCTTCG TTACCGAGAA AATTGTTGAG
CCTAAACTGG GGAAATATGA TCCGAGTCAG GCAGCCAATG ATCTTGGCGA AGCCAAAATG
GAGCAGATTA GCGCTATTGA AAAGCGTGGT CTAAAAGCCG CAGGCATCGC TATTTTAGTC
ATGTCTGTGC TATTAGCACT GACAGTGGTA CCAGAAGGTG CGCCTCTTAG AGATCCTAAA
ACCGGATTAG TCTCAGGCTC GCCATTTCTA AAAGGCATCG TTGCCTTTAT CTTTATCTGC
TTTGCCGTTC CAGGATTGGT TTATGGCCGT ATCGTTGGCA CCATGAAGCG CGATATCGAT
GTGATTAATG CTATGTCACA CAGCATGAGT AGCATGGGCA TGTACATTGT TTTGGTATTC
TTTGCCTCAC AATTTGTCGC TTTCTTTACC TGGACTAATT TAGGTTCGGT ATTTGCGGTT
GCAGGCGCTG ATGCATTACA AGCAATTGGC CTAACAGGCC CCTTGGTTTT CGTTGTGTTT
ATCGCTATGT GCGGCTTTAT TAACTTAATG CTCGGTAGTG CATCGGCGCA ATGGGCAGTC
ACCGCACCTG TATTCGTACC TATGTTAATG CTAGTGGGTT ATGCCCCGGA AACCATTCAG
GCTGCTTATC GAATCGGCGA CTCCGTCACT AATCTAATTA CGCCAATGAT GAGCTATTTT
GGTCTTATTT TGGCCGTCGC GTCGCAATAC AATAAGAACC TAGGTATTGG CACCTTAATC
GCGACTATGT TGCCATACAC CATAGTATTC TTTATCGGTT GGACCAGCTT CTTCTTTATC
TGGGTGTTCG GATTCGGATT ACCTGTCGGG CCGGGGTCGG CAACTTATTA TACGCCTTAA
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| Protein sequence | MSSNNGDRLH QSGGASLDPN NQVSGWFVRF LNIVERLGNL LPHPITLFAI FCAAVVVISG
IAGYFELSVV DPRPEGAAGR SSDGMIHVVS LMNAEGLRMI VSNLVTNFTG FTPLGTVLVA
LLGVGIAERS GLLSAAMRSL VMGTSKRLVT LTIVFAGIVS NTAAELGYVV LIPMAAMIFH
SLGRHPLAGL AAAFAGVSGG YSANLLLGTV DPLLSGITEA AAQMIDPDYT VGPEANWYFM
FASTFIITFL GAFVTEKIVE PKLGKYDPSQ AANDLGEAKM EQISAIEKRG LKAAGIAILV
MSVLLALTVV PEGAPLRDPK TGLVSGSPFL KGIVAFIFIC FAVPGLVYGR IVGTMKRDID
VINAMSHSMS SMGMYIVLVF FASQFVAFFT WTNLGSVFAV AGADALQAIG LTGPLVFVVF
IAMCGFINLM LGSASAQWAV TAPVFVPMLM LVGYAPETIQ AAYRIGDSVT NLITPMMSYF
GLILAVASQY NKNLGIGTLI ATMLPYTIVF FIGWTSFFFI WVFGFGLPVG PGSATYYTP
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