| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4057 |
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| Symbol | |
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| ID | 5664441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4929085 |
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| End bp | 4930704 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238721 |
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| Product | AbgT putative transporter |
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| Protein accession | YP_001503902 |
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| Protein GI | 157963868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.106368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA ATGACGGCGA TAGCTTGCCT CTATCTAGCC AAGCCCCCTT AGATCCCAGT
AACAAGCCTG GTGGCTTGTT TGTCCGCTTC CTAAACGTAG TTGAAAGACT CGGTAACTTA
CTACCTCACC CCATCACTCT TTTCGCGCTA TTTTGTGCCG CTGTTGTGGT TATCAGTGGC
ATCGCCGGTT ATTTTGAATT AACTGTAGTC GACCCAAGAC CCGAAGGTGC ATCGGGCCGC
AGCGCCGATG GTCTAATTCA TGTAGTCAGC TTAATGAATG CCGAAGGCCT CCGGATGATC
GTCTCCAACT TGGTGACCAA CTTTACTGGC TTTACCCCAT TGGGCACAGT GCTTGTCGCC
TTACTCGGTG TGGGTATCGC CGATCGCTCG GGCTTGCTGT CTGCCGCTAT GCGCTTATTA
GTCATGGGCG CTTCAAAGCG CTTAGTCACG CTAACTCTAG TATTTGCAGG TATCGTTTCT
AATACTGCAT CTGAGCTAGG CTACGTGGTG CTTATCCCAA TGGCAGCGAT GATCTTCCAC
TCCTTGGGTC GCCATCCGCT TGCAGGTCTA GCCGCTGCAT TTGCCGGTGT ATCCGGCGGC
TATAGCGCTA ACTTACTACT CGGCACCGTT GATCCACTGT TATCTGGGAT CACCGAAGCT
GCAGCGCAGA TGATCGATCC TGACTACCTT GTTGGCCCAG AAGTAAACTG GTACTTCATG
TTTGTCTCCA CCTTTTTAAT CACCTTCTTA GGTGCATTCG TTACCGAGAA AATCGTCGAA
CCTAAGTTGG GCAAATACGA TGCTAGCGAA GCGGCGATTG ACCTTAGTGA ACAGAAGATG
GATACGGTTA GCGCACTGGA GAAAAAGGGC CTAAAAATCG CAGGCCTTGC GGTATTAGTG
ATGTCGGCAG TGCTTGCTTT AACTATTATT CCTGAGGGTG CGCCACTTCG AAACCAAGAA
ACTGGCTTAG TAGCTGGCTC TCCTTTCTTA AAAGGGATTG TGGCCTTTAT CTTTGTTTGC
TTTGCTATTC CAGGCCTAAT TTATGGCCGT GTTGTGGGTA GCATGAAACG CGATATCGAT
GTCATCAACG CCATGTCACA CAGCATGAGT AGCATGGGCA TGTATATCGT CTTGGTATTC
TTTGCTTCGC AGTTTGTCGC TTTCTTTAAG TGGACCAACT TAGGGGCGGT ACTGGCAGTA
TCTGGCGCAG ATGCACTTAA TGCTATTGGC TTAACTGGGC CGCTAGTATT CGTACTGTTC
ATCATGATGT GTGGCTTTAT TAACTTGATG CTAGGTAGTG CTTCAGCGCA GTGGGCTGTA
ACCGCACCTA TCTTCGTACC TATGTTGATG TTGGTGGGTT ACGCACCCGA AACCATTCAG
GCGGCATACC GAATTGGTGA CTCTGTAACA AACCTAATTA CGCCAATGAT GAGTTACTTC
GGCCTTATCC TGGCCGTCGC CTCGCAGTAT AAGAAGAATC TAGGTATAGG CACATTGGTT
GCGACCATGC TGCCATACTC AATCGTGTTC TTTATCGGTT GGACCTGCTT CTTTTTCATC
TGGGTATTTG TGATTGGTTT ACCCGTTGGC CCGGGTGCAG CAACTTATTA TACGCCTTAA
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| Protein sequence | MSSNDGDSLP LSSQAPLDPS NKPGGLFVRF LNVVERLGNL LPHPITLFAL FCAAVVVISG
IAGYFELTVV DPRPEGASGR SADGLIHVVS LMNAEGLRMI VSNLVTNFTG FTPLGTVLVA
LLGVGIADRS GLLSAAMRLL VMGASKRLVT LTLVFAGIVS NTASELGYVV LIPMAAMIFH
SLGRHPLAGL AAAFAGVSGG YSANLLLGTV DPLLSGITEA AAQMIDPDYL VGPEVNWYFM
FVSTFLITFL GAFVTEKIVE PKLGKYDASE AAIDLSEQKM DTVSALEKKG LKIAGLAVLV
MSAVLALTII PEGAPLRNQE TGLVAGSPFL KGIVAFIFVC FAIPGLIYGR VVGSMKRDID
VINAMSHSMS SMGMYIVLVF FASQFVAFFK WTNLGAVLAV SGADALNAIG LTGPLVFVLF
IMMCGFINLM LGSASAQWAV TAPIFVPMLM LVGYAPETIQ AAYRIGDSVT NLITPMMSYF
GLILAVASQY KKNLGIGTLV ATMLPYSIVF FIGWTCFFFI WVFVIGLPVG PGAATYYTP
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