| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4054 |
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| Symbol | |
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| ID | 5664438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4925574 |
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| End bp | 4926317 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238718 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001503899 |
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| Protein GI | 157963865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGC GAGCACCCCT GTTTAGTTTA CTGTGCTTGT CTACTGCTGT GACTTCTGCA
GTTGTAACTC CTACAGCCAT GGCGGCAGAG ACGAGTAAGC CACATTTTGT TGCCAAACCA
TCGAATAAGA GTGTGTTAGG TCAAGCCGTT ACTAATCATA GCTTAACTAG CGGGACTCAG
AGCTTGGGAG CTAGTGTTGA ACAAGGAGAA AAGGTTTACC ACTACCTCAC CGCCGATGGA
GTCTTGGTTT TTAGCGATCA AGCGCCGCAA GAGGGGCATT ATCAGGTGTT ATTATTTGAC
TGCTACGCCT GCAAACCTGA GTCGAATATC AATTGGAAAT CAATCCCTCT GTTTACCTCA
CAATATCAGC AGCTGATCGC CACTGCGGCC AGAACATATC GGCTGGATCC TGCACTCATT
CGGGCCGTTA TTCATGCCGA ATCGGCTTTT AAGCCCAAGG CGCTATCTAA AACTGGGGCG
CAGGGTCTAA TGCAGCTGAT GCCCGCTACG GCCAATGAGC TGGGGGTGCG TGATGCCTTC
CATCCAGAGC AAAACATCTT GGCGGGTAGC CGTTATCTGG CTCAGCTACT GAAACGCTTT
AATGGTGATA TTGCCTTGGC CTGCGCCGCC TATAACGCCG GAGCCTCCCG AGTAGAGCAG
TATAAAGGCA TCCCGCCGTA CCCAGAGACC CAAGCTTACG TCGAACGGGT ACAGATTTTG
CTCAAGCGCT ACCGCAAGGC TTAA
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| Protein sequence | MMKRAPLFSL LCLSTAVTSA VVTPTAMAAE TSKPHFVAKP SNKSVLGQAV TNHSLTSGTQ
SLGASVEQGE KVYHYLTADG VLVFSDQAPQ EGHYQVLLFD CYACKPESNI NWKSIPLFTS
QYQQLIATAA RTYRLDPALI RAVIHAESAF KPKALSKTGA QGLMQLMPAT ANELGVRDAF
HPEQNILAGS RYLAQLLKRF NGDIALACAA YNAGASRVEQ YKGIPPYPET QAYVERVQIL
LKRYRKA
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