| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4049 |
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| Symbol | |
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| ID | 5664433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4919772 |
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| End bp | 4921013 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238713 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001503894 |
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| Protein GI | 157963860 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGTGC AACTAACGCC AACGCTAAGC TTAAACGTGG TTCAGCAACA CCTTGTTGAT
GCTGAAGATT CGTCACGTAT CGAACTCAGC TTTGCCGAGA CCGCAGTGTT ACAGTTGATG
CTCAAGCATC AAGGTACCCT AATTACTCGC GAAGCCTTAC TCGAGGCGGG CTGGCATGAT
CGCGTGGTTT CCGCGTCATC ATTACAACAA TGTATTAGTG TGCTCAGAAA AAAGCTGGCT
AACTACCCAG AAGTCGAGCT TAAAACGATT CCAAGACACG GTTATGTGTT GCATCTTGCT
AACCAAAGCA AAAACAACTA CCGCTTTAAA AAGCCAAAGG CTACGTTGCT ATTTGCAGTC
GCGGTTATCG CATCACTGCT CTTGCTCAGC TACGCTTATA TCAACCACAA CCAAGCGCCT
TATAACGAGA GCTTAGTAAA CAGTAAGCTA AGCAGTGTTG CTGGTAATAT TCACGTATTT
ACAGCTGCTA AGCAGCCAAA ACAGTCAGCC GATGACACCA ATAAACGCCT AAAAAACCAA
ATAAATGATG AGCCGAACTG GCAAGCGCCA TTTACTAGCT TTACCAGCTT TGGGCTACTC
AGCGACAAGA TGGACAGCTT TGCGATTTGC CCTGACTACC AACAAAATCA ATGCAGTGGT
AAACAGCTGA TCAATATCAG TAGCGAAACC AAACACGGCG GCCAACTAGA GCTATCTGAT
TTCCTAACCA CCAAGATCAG GATGGAGCAG AAGACCTATA ATAAATTAGA TCTACCAGAA
CTTAGAAAGC ATCAAGGCGA TCTCAAAGAG CAGATCTATC ATGGCGATTT GTACTTTTCG
ATCGATGATC ATCGCTTAGT TCGTAGCGAC ATTCGAATTT CATTAGTCGA TCTCGCGCCT
GACAGCGGCA TATTTTATTT CGCAGCCTGC ATCACCGACG AAGACTGTTA CACCACACCA
ATCCGCTACG AGATCCGCGG TCATTTCAAA CGCACCACAG AAAAATGGCA ACAACGCACT
GTTGAACGCT TTGATATCGA GGTCAGCAAA ACCACGCTGT CGTCACCCAA TGCACTGTCT
GATACTGCGC AAATCATCTA CCTTGCCCTC AGGAAGCAGC ATTTAACCCA AGAACAGCTG
AGTTTCTATC GCATCTATCA AGACGATGGC ACCGCTATCT GGCAACTGCC GTTAGTGAAC
GACAATATTA TGTGGATGCA ACGACAGACA CTCAAATTAT GA
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| Protein sequence | MPVQLTPTLS LNVVQQHLVD AEDSSRIELS FAETAVLQLM LKHQGTLITR EALLEAGWHD
RVVSASSLQQ CISVLRKKLA NYPEVELKTI PRHGYVLHLA NQSKNNYRFK KPKATLLFAV
AVIASLLLLS YAYINHNQAP YNESLVNSKL SSVAGNIHVF TAAKQPKQSA DDTNKRLKNQ
INDEPNWQAP FTSFTSFGLL SDKMDSFAIC PDYQQNQCSG KQLINISSET KHGGQLELSD
FLTTKIRMEQ KTYNKLDLPE LRKHQGDLKE QIYHGDLYFS IDDHRLVRSD IRISLVDLAP
DSGIFYFAAC ITDEDCYTTP IRYEIRGHFK RTTEKWQQRT VERFDIEVSK TTLSSPNALS
DTAQIIYLAL RKQHLTQEQL SFYRIYQDDG TAIWQLPLVN DNIMWMQRQT LKL
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