| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4041 |
|---|
| Symbol | |
|---|
| ID | 5664425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4908089 |
|---|
| End bp | 4909378 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641238705 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001503886 |
|---|
| Protein GI | 157963852 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG AATCATTTGA CGCCATTATC GTAGGCGCAG GGCTTGCAGG TTGTGTTGCG
GCGTACGTTC TTGCAAAAGA GGGAGCCGAC GTTCTGGTAA TTGAACGTGG TAACTATGCT
GGTAGCAAGA ATATGACCGG CGGTCGTTTA TACGCTCACA GCCTAGAAAA AATTATTCCT
GGTTTTGCCA AAGAAGCGCC AATAGAAAGA AAAGTCACTA AAGAAAAAGT CACCTTTCTA
ACTGATGATA CAGGCGTCAC TCTCGACTAC CACAACGGTC GGGATCAAAC TGCAGTTGAA
GAATCTTATA CCCTATTAAG AGGGGATTTT GACCAGTGGT TAATGGGCAA GGCCGAAGAG
GTTGGTGCGC AATTCATTAC TGGTATTCGT GTTGAGGAGA TCTTAACCCA AGACGGTAAA
GTCATTGGTG TGAAAGCTGA TGGTGATGAG CTAACTGCCA AATCAGTAAT TCTGGCAGAA
GGAGTTAACC CGGTTCTTGG TGAACAACTT GGAATGGTTA AACGTGTTAA ATCAGATGCT
ATGGCCGTTG GAGCAAAAGA GTTAATCGAG CTACCACAAA AGGTTATTCA GGATCGTTTT
AACCTTAATG ATGACGAAGG TTGTGCTTGG TTATTTGCAG GCTCCCCCGC CAACGGTTTG
ATGGGCGGTG GATTCATTTA TACCAATAAA AGCTCAGTTT CATTGGGTAT CGTCTGTGGT
TTACATGATA TTGGCAGTTC AGATAAAACT GTACCGCAAA TGCTTGAAGA CTTTAAAAAC
CACGCCATGA TCAAGCCCCT TATAGAAGGC GGTAAACTGA TTGAATACTC AGGTCACGTT
GTGCCTGAAG CCGGTATTCA TATGGTGCCA AAACTTGTTG ATGACGGCGT ATTAATTACC
GGAGATGCTG CAGGCTTTTG CTTAAATATC GGCTACACAG TCCGCGGCAT GGATCTGGCT
ATTGCCTCGG GTGAAGCAGC AGCCAAAGCA GTATTGGCCG CACGAGAGAA AAACGATTTT
AGTGCGCAAG GTTTATCTTC TTATCAAACA TTACTAGAAG ATAGCTTCAT CATGAAAGAT
CTCAAGTTGT ACAAAGAGTT ACCTAAGTTC ATGGAGAACC CTCGCATCTT TAATGAATAT
CCAAAAATGG TGGCCGACAT AATGCAAAGC ATGTTCACCG TCGACGGCAC TCCATCACAA
CCAATAAGAA AAACTCTCAT GAAGCACTGT AAAGAAGTGG GTTACATGAA TCTGATTAAA
GATGGAATTA AAGGAGTGAC TTCAATATGA
|
|---|
| Protein sequence | MSEESFDAII VGAGLAGCVA AYVLAKEGAD VLVIERGNYA GSKNMTGGRL YAHSLEKIIP
GFAKEAPIER KVTKEKVTFL TDDTGVTLDY HNGRDQTAVE ESYTLLRGDF DQWLMGKAEE
VGAQFITGIR VEEILTQDGK VIGVKADGDE LTAKSVILAE GVNPVLGEQL GMVKRVKSDA
MAVGAKELIE LPQKVIQDRF NLNDDEGCAW LFAGSPANGL MGGGFIYTNK SSVSLGIVCG
LHDIGSSDKT VPQMLEDFKN HAMIKPLIEG GKLIEYSGHV VPEAGIHMVP KLVDDGVLIT
GDAAGFCLNI GYTVRGMDLA IASGEAAAKA VLAAREKNDF SAQGLSSYQT LLEDSFIMKD
LKLYKELPKF MENPRIFNEY PKMVADIMQS MFTVDGTPSQ PIRKTLMKHC KEVGYMNLIK
DGIKGVTSI
|
|---|
| |