| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4013 |
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| Symbol | |
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| ID | 5664397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4874918 |
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| End bp | 4875685 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641238677 |
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| Product | bioH protein |
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| Protein accession | YP_001503858 |
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| Protein GI | 157963824 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAGA GCCAGCTACA TATCGAATCT ATCGGTCAAG GGCCCGATGT TGTAATGCTT
CATGGTTGGG GGGTTAACAG CGCCGTATTT ACTCCACTGC AGGGCGCATT AGCCAAGTAT
AGGGTTCACT TCGTCGATCT GCCGGGATTT GGCCATAGCC CAGCGGTCAA TGGCGATATC
TACGACTGGC TAAACGCCAT CTTAGAAGCG GTTCCTGAGC AAGCGATCTG GACTGGCTGG
TCACTCGGCG GACTCATTGC TACATTAGCC GCCATCCATC ATCCGCAGCG TGTGTCGGCG
CTATGCACCA TAGCCTCATC GCCTTGCTTT ATGGCGGGTG AAGACTGGCC GGGGATCCCG
GAAAAGGTAT TGAGCCAATT CGCCCAACAG CTGACTCAAG ATCTCGATAA GACCATCGAA
CGCTTTCTTG CTATCCAAGC CATGGGTAGC GAAACCGCCA AGGGCGATAT CAAACAATTA
CGTGAGTTAG TGCTTACTAA ACCTCAGGCT CAACAGACAG CTCTGGCCCA AGGATTAGCG
ATGCTTGAAC GGGTCGACTT ACGTGCCGAG TTATCTCAAA TCAACCAACC TTGGCTAAGA
GTCTGGGGAC GATTAGATGG GTTAGTGCCG CGCAGAATGA TAAAAGCCAT GCCACAGCTG
CCGCAAAGCC AAGACCTATT ACTTCACAAG GCCTCTCACG CGCCGTTTAT TAGCCACCAG
CAAGAGTTTC TCGACGGCTT CAATCTATGG CTCGACGAGC AAGTCTAG
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| Protein sequence | MSQSQLHIES IGQGPDVVML HGWGVNSAVF TPLQGALAKY RVHFVDLPGF GHSPAVNGDI
YDWLNAILEA VPEQAIWTGW SLGGLIATLA AIHHPQRVSA LCTIASSPCF MAGEDWPGIP
EKVLSQFAQQ LTQDLDKTIE RFLAIQAMGS ETAKGDIKQL RELVLTKPQA QQTALAQGLA
MLERVDLRAE LSQINQPWLR VWGRLDGLVP RRMIKAMPQL PQSQDLLLHK ASHAPFISHQ
QEFLDGFNLW LDEQV
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