| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4012 |
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| Symbol | |
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| ID | 5664396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4874147 |
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| End bp | 4874896 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238676 |
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| Product | competence protein ComF |
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| Protein accession | YP_001503857 |
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| Protein GI | 157963823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAACTTA ACAATGAAAA GGATTTCATT ATTAGCAAAA CACCTTGGAC TCGGTGGTTA
TCGGCAATTT TACCCAATCG CTGTTTATTG TGCCATCAAC ATATTGATTC GGTTAATCGT
GGGATCTGTT CCGTTTGCCT GCATGCTTGC CGTTATCAAA CGCCCATCTG TTTGGGCTGT
GGCGGTGAGA TGCTAATAAG CATGGCTTTC TGCGGTCATT GCATGGCATC GACGCCATTA
ACCGTTATCG CTCCCTGCAG TTATCACCAT GGCCTAGGTC ACTGGGTCGG ACAGGTTAAG
TATCAGGCGC AATTTGCGGT GATCGATGTG CTGGTGGACG CGCTGGTTCA GCGGATCCTC
TATCTAGAAT ATTTAGGCTT TATCCAGCTG CCACAGGCGT TGATTGCCGT GCCGCTACAT
AAGAGCAGGC TGCGGCAACG GGGCTTTAAT CAGGCTTGGC TAATCGCTAA GGCACTGTCT
AAGCGACTCG ATATACCACT GGTCGATAAT ATGCTGTTTA GGATGAAAGA GACTCAGCCG
CAAGCGGGAT TGTCGGGTAG GTTACGGCGT AAAAACCTTA AAGGCGCCTT TGAGCTTTCA
CCTGAGTTTA ACTGGCAGCG GGTAGCGCTG ATCGATGATG TGGTGACCAC GGGCACGACG
GTAGAGGAGA TCGCGAAATT ATTGCAGCGA AAGCACACTC AGGTTCAAGT TTGGTGCCTG
GCTAGAGCCG AGGCACCGGG GCGCCGCTAA
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| Protein sequence | MKLNNEKDFI ISKTPWTRWL SAILPNRCLL CHQHIDSVNR GICSVCLHAC RYQTPICLGC
GGEMLISMAF CGHCMASTPL TVIAPCSYHH GLGHWVGQVK YQAQFAVIDV LVDALVQRIL
YLEYLGFIQL PQALIAVPLH KSRLRQRGFN QAWLIAKALS KRLDIPLVDN MLFRMKETQP
QAGLSGRLRR KNLKGAFELS PEFNWQRVAL IDDVVTTGTT VEEIAKLLQR KHTQVQVWCL
ARAEAPGRR
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