Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4012 |
Symbol | |
ID | 5664396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4874147 |
End bp | 4874896 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641238676 |
Product | competence protein ComF |
Protein accession | YP_001503857 |
Protein GI | 157963823 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTTA ACAATGAAAA GGATTTCATT ATTAGCAAAA CACCTTGGAC TCGGTGGTTA TCGGCAATTT TACCCAATCG CTGTTTATTG TGCCATCAAC ATATTGATTC GGTTAATCGT GGGATCTGTT CCGTTTGCCT GCATGCTTGC CGTTATCAAA CGCCCATCTG TTTGGGCTGT GGCGGTGAGA TGCTAATAAG CATGGCTTTC TGCGGTCATT GCATGGCATC GACGCCATTA ACCGTTATCG CTCCCTGCAG TTATCACCAT GGCCTAGGTC ACTGGGTCGG ACAGGTTAAG TATCAGGCGC AATTTGCGGT GATCGATGTG CTGGTGGACG CGCTGGTTCA GCGGATCCTC TATCTAGAAT ATTTAGGCTT TATCCAGCTG CCACAGGCGT TGATTGCCGT GCCGCTACAT AAGAGCAGGC TGCGGCAACG GGGCTTTAAT CAGGCTTGGC TAATCGCTAA GGCACTGTCT AAGCGACTCG ATATACCACT GGTCGATAAT ATGCTGTTTA GGATGAAAGA GACTCAGCCG CAAGCGGGAT TGTCGGGTAG GTTACGGCGT AAAAACCTTA AAGGCGCCTT TGAGCTTTCA CCTGAGTTTA ACTGGCAGCG GGTAGCGCTG ATCGATGATG TGGTGACCAC GGGCACGACG GTAGAGGAGA TCGCGAAATT ATTGCAGCGA AAGCACACTC AGGTTCAAGT TTGGTGCCTG GCTAGAGCCG AGGCACCGGG GCGCCGCTAA
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Protein sequence | MKLNNEKDFI ISKTPWTRWL SAILPNRCLL CHQHIDSVNR GICSVCLHAC RYQTPICLGC GGEMLISMAF CGHCMASTPL TVIAPCSYHH GLGHWVGQVK YQAQFAVIDV LVDALVQRIL YLEYLGFIQL PQALIAVPLH KSRLRQRGFN QAWLIAKALS KRLDIPLVDN MLFRMKETQP QAGLSGRLRR KNLKGAFELS PEFNWQRVAL IDDVVTTGTT VEEIAKLLQR KHTQVQVWCL ARAEAPGRR
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