| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4010 |
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| Symbol | |
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| ID | 5664394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4870783 |
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| End bp | 4871361 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238674 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_001503855 |
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| Protein GI | 157963821 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR03341] IscR-regulated protein YhgI |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTACCA TTTCCGAAGC AGCTCAGGCG CATTTTGTTA AATTGTTATC AGATCAGCCT
GAAGGAACTC ACATTCGAGT ATTTGTTATC AGCCCAGGTA CTGCGCAGGC TGAGTGTGGC
GTATCATATT GTCCACCAGA CGCTGTTGAA GCTGATGACA CAGAGATCGA ATTTAATGGC
TTTAATGCCA TGGTTGATGA GAAAAGCGCT CCTTTCCTTG AAGAAGCGAC AATTGACTTC
GTTACCGATC AGTTAGGTTC TCAGTTAACG CTTAAGGCAC CTAACGCTAA AATGCGTAAA
GTGTCTGATG ACGCTTCATT ATCTGAGCGT ATCGAGTATG TTATCCAGTC TGAAATTAAC
CCACAGCTTG CTAGCCATGG TGGTAACATC ATGCTAGTTG AAATCACTGA AGACGGCATT
GCAGTATTGC AGTTTGGTGG TGGTTGTAAT GGTTGCTCTA TGGTTGATGT AACTCTAAAA
GATGGTATCG AGAAGCAACT ACTTGATATG TTCCCAGGTG AACTATCAGG CGTTAAAGAC
GTGACCGAGC ACCAGCATGG TGAGCACTCT TACCAGTAA
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| Protein sequence | MITISEAAQA HFVKLLSDQP EGTHIRVFVI SPGTAQAECG VSYCPPDAVE ADDTEIEFNG
FNAMVDEKSA PFLEEATIDF VTDQLGSQLT LKAPNAKMRK VSDDASLSER IEYVIQSEIN
PQLASHGGNI MLVEITEDGI AVLQFGGGCN GCSMVDVTLK DGIEKQLLDM FPGELSGVKD
VTEHQHGEHS YQ
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