| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4009 |
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| Symbol | |
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| ID | 5664393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4869359 |
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| End bp | 4870690 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238673 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001503854 |
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| Protein GI | 157963820 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCT TACTGTTAAA CCCACAAAAA AACCGACAAC TGTTTGCCCT CGCACTACCG
ATGATTTTAT CAAATATCAC GGTGCCATTA CTGGGACTTG TCGATACCGC CGTTGTTGGA
CACCTTAGTA ACGCCTATTA TTTAGGCGGT GTGGCAGTTG GGTCAACGAT TATAACCTTA
ATTTTGTGGT TGCTAGGATT TTTACGCATG TCGACCACGG GATTAGTCGC TCAAGCCTAT
GGCGCCAACG ACACCCAGCA ACAATTTAAA CTCTTGGTAC AAGCAGCAAG TCTAGCACTC
CTGTTTGGTA TTGCCGCTAT CGCATTACAG CTACCCATAG TGAATTTAGC CATGGCGTTG
TCAGATGCCA GCGTCGAAGT CGAGCGCTAT TGCCGAGAGT ATTTCCAGAT CAGGATCTGG
TCGACCCCCT TCGCCCTAAT GAATTTAGTG CTTCTTGGCT GGCTCCTTGG GCGGCAGCAA
CCTAAGGCCG CGATGTGGCA ACTGATTGTG GCAAACCTAG TAAATATCGT ATTAGATGTC
ATCTTCGTGC TAGGTCTTGG CTGGGGTGTG AAAGGAGCGG CACTCGCCTC TGTGTTCGCC
GATATCTCTG GTTTCTTAGT AGCACTCACC ATGGTTCGCA GTCAGCTTGG TAAGCTAGGT
GATTTTAAGT TGCTACAACT CATCAAGCAG CTTTCCCTGC AAAGCTACGC CAAGATGATG
AGCCTTAACA CAGACATCTT TATTCGTAGC CTATGTTTGC AAGCATCATT TGCCTTTATG
ACTTTTTACG GCGCAGGCTT AGGTGATAAT ACCGTTGCAG CCAATGCCGT ATTACTCAAC
TTATTGCTAC TCATCTCCTA TGCACTCGAT GGCATCGCCT ATTATGCAGA GGCCGAGGTG
GGTCGAGCTC ATGGCCAGAA AAATAGCCGT TTAATGCAGG AATCGGTGAC ATTAGCCTGG
GCATGGTCAG CCATTGCCGC ATTAGGCTTT ACGCTATTTT TTGCCCTCGC GGGTTCGCAG
ATTATCGCTA TGTTGACCAG CATCAGTGAA GTACAAGCAG TGGCCGAACA ATATCTGATT
TGGATTATAT TCATCCCCTT GCTCGCCTTT GGCTCCTATC TTTTTGATGG TGTCTATATC
GGTGCAGCTC AGGGCAAGGT GATGCGTAAC AGTATGATTC TATCTACTTT TGGCGTATTT
TTCCCGGTCT GGTACCTATT AGAACAGCAG GGTAACTTTG CCTTATGGGC AGCCATGAGC
AGCTTTATGC TGGCCCGCAG TGCGTTACTT TCGCTGCATT ACTGGTTTAG GCTCAGACTG
ATTTTAAACT AG
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| Protein sequence | MIALLLNPQK NRQLFALALP MILSNITVPL LGLVDTAVVG HLSNAYYLGG VAVGSTIITL
ILWLLGFLRM STTGLVAQAY GANDTQQQFK LLVQAASLAL LFGIAAIALQ LPIVNLAMAL
SDASVEVERY CREYFQIRIW STPFALMNLV LLGWLLGRQQ PKAAMWQLIV ANLVNIVLDV
IFVLGLGWGV KGAALASVFA DISGFLVALT MVRSQLGKLG DFKLLQLIKQ LSLQSYAKMM
SLNTDIFIRS LCLQASFAFM TFYGAGLGDN TVAANAVLLN LLLLISYALD GIAYYAEAEV
GRAHGQKNSR LMQESVTLAW AWSAIAALGF TLFFALAGSQ IIAMLTSISE VQAVAEQYLI
WIIFIPLLAF GSYLFDGVYI GAAQGKVMRN SMILSTFGVF FPVWYLLEQQ GNFALWAAMS
SFMLARSALL SLHYWFRLRL ILN
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