| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4007 |
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| Symbol | |
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| ID | 5664391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4867601 |
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| End bp | 4868230 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238671 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001503852 |
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| Protein GI | 157963818 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.612084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTCA CCTGGATAAT TGCGGCCGTG TTAATGGTAG CAGCGGGCGT ATACGCAAGC
ATACAGTTAG CTCAGCCAAA GAACTTAGCG CTGCAAACCA GCTTCGAGTA TCCGGCGCCG
CTGCCATTAG CGCCTTTCTC GCTAACAGAT CAACGGGGCA ATAGCTTTAG CAATACCGAC
CTGCTTGGCA AGTGGAGTCT GTTTTTCATC GGCTACACCT CCTGCCCAGA TGTTTGCCCT
ACCACCATGG GCAAGTTGAG CTCAGCCTAC CCCAAGCTCA CAGACAAAGC CGAGCTGCAG
GTGATTTTCC TGTCGGTCGA TCCTCAAAGA GACTCTACAG AAACCTTAGA AAACTATATT
AAATTCTTTA ATCCCGAGTT TATCGCCGTA ACCGGAGAGC ATAGCCAGTT GTTTCCGGTG
ACTCGCAGCT TAGGTTTCGT CTATGCCATG GTAGGAAATG GCCCTGATTA TCAGGTCGAT
CACAGCGCCT CATTTGCCTT AGTTTCACCT CAAGGGGAGA AGATCGCCAT CATCAAGCCG
AAATCGAGTA GTCCGGGAAA ACTGCCGCAG ATCAAAAATA GCGATTTAAT TCATGACGTC
AATGCAATTA TTGATAAGTA TTCCGGTTAA
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| Protein sequence | MKLTWIIAAV LMVAAGVYAS IQLAQPKNLA LQTSFEYPAP LPLAPFSLTD QRGNSFSNTD
LLGKWSLFFI GYTSCPDVCP TTMGKLSSAY PKLTDKAELQ VIFLSVDPQR DSTETLENYI
KFFNPEFIAV TGEHSQLFPV TRSLGFVYAM VGNGPDYQVD HSASFALVSP QGEKIAIIKP
KSSSPGKLPQ IKNSDLIHDV NAIIDKYSG
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