| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4006 |
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| Symbol | |
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| ID | 5664390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4866661 |
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| End bp | 4867566 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238670 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001503851 |
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| Protein GI | 157963817 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC AGATCGCATT ACCAAGAAGC CAAACAAGCC CGCTATTTCA ATGGCGCGCC
TATTATGAAA TGACTAAGCC TAAAGTCGTC GCACTTATGC TGCTCACAGT TTTAGTGGGT
ATGTGTTTAG CCGTCCCGGG GACCGTTCCA CTCGTGCCAT TAATTGCTGG CATGGCAGGG
ATTGGCATGA TGGCAGGCTC TGCCGCTGCC TTTAATCATT TAATCGATCG CCGCATCGAC
GGATTAATGG CTCGAACCTA CAACCGCCCA CTGCCTAAAG GGCGGATCTC GATAATCAAG
GCGATTAGCT TTGCCTCTAT TCTAGGGACA TTAGGTTTCA TCATCCTCTA TGCCTTAGTA
AATCCACTCA CCGCCTGGCT CACCTTTGCC AGCTTAATCG GTTATGCCGT GGTTTATACC
GCTTACTTGA AACGAGCGAC GCCGCAAAAC ATTGTGGTTG GGGGCTTGGC TGGAGCCATG
CCCCCACTGC TAGGTTGGAC TGCAGTAACG GGAGAGTTTC ATGGTAATGC ACTGCTGCTG
GTGATCATCA TCTTTGCATG GACGCCGCCT CATTTCTGGG CGCTAGCGAT TCACCGTAAG
GCCGAATATG CCAAGGTGGA TATTCCTATG TTGCCGGTTA CTCACGGCGT TGAATTCACC
AAAACCTGCA TCTTTCTCTA TACGGTATTG TTAGCCATAG CCTGTTTATT ACCAGTATTA
GTCGGCATGT GCGGCCCGGT TTATCTAGTA AGTTCAACCC TGCTCAGTGC TGGCTTTATC
TATAAAGCTT GGCAGCTCAA GTTCCATGAA ACCCCTGGGC TTGCGATGAA TGTATTTAAG
TTTTCTATCT ATCACTTAAT GCTGCTATTT ATCGCTTTAC TGGTCGATCA TTATTTATGG
GTGTAA
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| Protein sequence | MAKQIALPRS QTSPLFQWRA YYEMTKPKVV ALMLLTVLVG MCLAVPGTVP LVPLIAGMAG
IGMMAGSAAA FNHLIDRRID GLMARTYNRP LPKGRISIIK AISFASILGT LGFIILYALV
NPLTAWLTFA SLIGYAVVYT AYLKRATPQN IVVGGLAGAM PPLLGWTAVT GEFHGNALLL
VIIIFAWTPP HFWALAIHRK AEYAKVDIPM LPVTHGVEFT KTCIFLYTVL LAIACLLPVL
VGMCGPVYLV SSTLLSAGFI YKAWQLKFHE TPGLAMNVFK FSIYHLMLLF IALLVDHYLW
V
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