Gene Spea_4004 details

Gene Information

• Locus tag: Spea_4004
• ID: 5664388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4864923
• End bp: 4865465
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641238668
• Product: hypothetical protein
• Protein accession: YP_001503849
• Protein GI: 157963815

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCCC CCAAAAAGAA CGGCAAGAAA ACGCTAATGT TATTAATACT GGCTTTTGCC 
CTGCCCGTCA TGGCGGCAAA ACTAGTACTC AGTTTCAATC TATACAATGG TGGCGCGACC 
AATAAAGGTC AGCTATTAGA TAGCGTCAGC TATACCAATC TAGCCATGGC TAATCCTCAG 
CCTCAAGAGT GGCAACTGTT ATATCAATTA CCTCGCCATT GCGATGTCAT CTGTGAAGAT 
AGGCTCTATA TCTTACAGCA GAGCCATATT GCCCTCGGCC GTAATCAAGA CCGCGTACAC 
ACCATCATTA TGGTTAATCA GCAAAGTGAT ACTGCCGCAT TAACAGGCTT CGATTTTGTT 
ACTGCCACAC CATCTAAGCA GCTTAGCCAA TTACTCAACC AACAAGAATT CATTATCGTC 
GATCCCCTCG GCAGTTTAGT CATGAGCTAT CCAATAGCCG AAGATCATCA AGCACAGATC 
ATGCAAGGCA AGGCCTTAGT CGCCGATCTA CGTAAGCTAC TCAAGCTTTC GCGAATTGGC 
TAA 

 

Protein sequence

MNSPKKNGKK TLMLLILAFA LPVMAAKLVL SFNLYNGGAT NKGQLLDSVS YTNLAMANPQ 
PQEWQLLYQL PRHCDVICED RLYILQQSHI ALGRNQDRVH TIIMVNQQSD TAALTGFDFV 
TATPSKQLSQ LLNQQEFIIV DPLGSLVMSY PIAEDHQAQI MQGKALVADL RKLLKLSRIG