| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4002 |
|---|
| Symbol | |
|---|
| ID | 5664386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4862874 |
|---|
| End bp | 4863755 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641238666 |
|---|
| Product | cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_001503847 |
|---|
| Protein GI | 157963813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTG AAAATAAGCA CGAAAATTAT TACGTTCCAG AGCAAAGCGC TTGGCCGATT
ATCGGTGCAA TTGGACTATT TCTGATCGCC TTTGGTGCTG GTAGCTATGT TTCACAACTG
CAAGCAGAAG GCGGCAGCGG CGGCTATATC CTACTCGCAG GGATTGCCGT GATTATATTT
ATGATCTTTG GCTGGTTTAG AACCGTTATA GCCGAATCGA TGGCAGGCCT CTACTCCAAG
CAGATGGATC GCTCTTTTAG GCAAGGCATG AGCTGGTTTA TTTTCTCTGA AGTCATGTTC
TTTGCCGCCT TTTTCGGTGC GTTATTTTAT GCCCGTATGA TATCAGTGCC TTGGTTAGGT
GGTGCATCGA ATAACGCCAT GACCAATGAA GTGTTATGGC CAACCTTTGA AGCTGTTTGG
CCGCTAATCA CTACACCAGA CGGCAGCACG ACCCAAGCTA TGGGCTGGAT GGGTCTGCCC
TTGTATAACA CCTTAATCCT ATTGACCTCC TCTGTAACAT TACACTTTGC CCACGTGGGG
CTCGAGAAAG ATAAACGTAA AGCGTTAACC ATTTGGTTAG GCCTGACTAT TTTATTGGGT
ATCGCTTTCC TAGGCTTGCA AGCTGAAGAG TATATTCATG CCTACCAAGA GATGGGACTG
ACTCTAGATG CGGGCGTTTA CGGCAACACC TTCTTCCTAT TAACGGGCTT TCACGGAATG
CACGTCACCT TAGGTACCGT GTTTCTGATA GTGCTATTTT TTAGAGTGCT CAAGGGGCAT
TTTACCCCAG ATAAGCACTT TGCCTTCCAA GCTGGTGCTT GGTATTGGCA CTTTGTTGAT
GTGGTGTGGC TGTGTCTATT TATCTTTGTG TATGTACTTT AA
|
|---|
| Protein sequence | MTIENKHENY YVPEQSAWPI IGAIGLFLIA FGAGSYVSQL QAEGGSGGYI LLAGIAVIIF
MIFGWFRTVI AESMAGLYSK QMDRSFRQGM SWFIFSEVMF FAAFFGALFY ARMISVPWLG
GASNNAMTNE VLWPTFEAVW PLITTPDGST TQAMGWMGLP LYNTLILLTS SVTLHFAHVG
LEKDKRKALT IWLGLTILLG IAFLGLQAEE YIHAYQEMGL TLDAGVYGNT FFLLTGFHGM
HVTLGTVFLI VLFFRVLKGH FTPDKHFAFQ AGAWYWHFVD VVWLCLFIFV YVL
|
|---|
| |