| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4000 |
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| Symbol | |
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| ID | 5664384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4860695 |
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| End bp | 4862299 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238664 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001503845 |
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| Protein GI | 157963811 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA TTACACAAGA TTCACCAGCC GCTCACGACG ATCACCATGA TGACCATCAT
CATGGGGCGC CGAAAGGCAT CATGCGCTGG ATTTTAACCA CCAATCACAA AGATATTGGT
ACGCTTTATT TATGGTTTAG CTTCATCATG TTCCTGACCG GTGGCGCCAT GGCAATGGTG
ATCCGTGCAG AACTGTTTCA ACCGGGCCTA CAGTTAGTCG AGCCCAACTT TTTTAACCAG
ATGACCACAG TCCATGGCTT AATCATGGTA TTCGGTGCGG TAATGCCGGC CTTTACCGGC
TTGGCTAACT GGTTAATTCC GATGATGATT GGTGCGCCAG ATATGGCGCT TCCGCGAATG
AATAACTGGA GTTTTTGGAT CCTACCTTTT GCATTTTCGA TCTTGCTAAG CTCGCTATTT
ATGGAAGGAG GCGGGCCTAA CTTTGGTTGG ACCTTCTACG CGCCGTTATC GACAACCTAT
AGCCCTGACA GCACCGCATT ATTTGTGTTT GCCGTTCACA TAATGGGAAT TAGCTCAATC
ATGGGTGCGA TTAACGTGGT TGTCACCATA GTTAATATGC GCGCGCCGGG CATGACTTGG
ATGAAACTAC CGCTATTTGT ATGGACCTGG TTAATTACTG CATTTTTATT GATTGCCGTG
ATGCCCGTGC TTGCAGGTGT AGTCACCATG GTGCTGACAG ATAAATACTT CGGCACTAGC
TTTTTCGATG CCGCTGGCGG CGGCGACCCT GTGATGTTCC AGCATATCTT CTGGTTCTTC
GGCCACCCTG AAGTCTACAT CATGATCTTG CCCTCTTTCG GCATTATCTC AGCGATTGTG
CCCGCCTTTA GCCGCAAACG TCTATTTGGT TACTCCTCTA TGGTTTATGC CACGGCGAGT
ATCGCAATCT TGTCGTTCTT GGTTTGGGCA CACCACATGT TTACCACTGG CATGCCGGTA
TTTGCCGAGC TCTTCTTTAT GTATTGCACC ATGTTGATTG CGGTGCCCAC CGGAGTAAAG
GTGTTTAACT GGGTAGCGAC TATGTGGAGA GGCTCGATCA GCTTCGAGAC CCCCATGTTG
TTTGCAGTGG CATTTATTAT TTTGTTCACT ATCGGCGGCT TCTCAGGTTT GATGCTGGCG
ATTACTCCCG CGGACTTCCA GTACCATGAT ACCTACTTCG TAGTGGCGCA TTTCCACTAT
GTGTTAGTCA CCGGAGCCAT ATTCTCGATA ATGGCGGCGG CCTATTACTG GCTACCAAAG
TGGACGGGCA ACATGTATAG CGAAACATTA GGCCGCTGGC ACTTCTGGTG TTCAGTTATT
TCGGTGAACG TATTGTTCTT CCCAATGCAT TTTCTTGGGC TTGCGGGTAT GCCACGACGG
ATCCCTGATT ATGCGATTCA ATTTGCCGAT GTTAACCAGA TAGTCTCCAT CGGGGGATTT
GCTTTTGGTC TGTCGCAGCT GATTTTCTTA GCCGTGGTGA TTAAATGTAT TCGCGGTGGT
GAGAAAGCGC CAGCTAAACC GTGGGAAGGA GCCGAAGGTC TAGAATGGAC AATACCAAGC
CCCGCTCCCT ATCACTCGTT TACTACGCCA CCAGAGGTGA AGTAA
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| Protein sequence | MSTITQDSPA AHDDHHDDHH HGAPKGIMRW ILTTNHKDIG TLYLWFSFIM FLTGGAMAMV
IRAELFQPGL QLVEPNFFNQ MTTVHGLIMV FGAVMPAFTG LANWLIPMMI GAPDMALPRM
NNWSFWILPF AFSILLSSLF MEGGGPNFGW TFYAPLSTTY SPDSTALFVF AVHIMGISSI
MGAINVVVTI VNMRAPGMTW MKLPLFVWTW LITAFLLIAV MPVLAGVVTM VLTDKYFGTS
FFDAAGGGDP VMFQHIFWFF GHPEVYIMIL PSFGIISAIV PAFSRKRLFG YSSMVYATAS
IAILSFLVWA HHMFTTGMPV FAELFFMYCT MLIAVPTGVK VFNWVATMWR GSISFETPML
FAVAFIILFT IGGFSGLMLA ITPADFQYHD TYFVVAHFHY VLVTGAIFSI MAAAYYWLPK
WTGNMYSETL GRWHFWCSVI SVNVLFFPMH FLGLAGMPRR IPDYAIQFAD VNQIVSIGGF
AFGLSQLIFL AVVIKCIRGG EKAPAKPWEG AEGLEWTIPS PAPYHSFTTP PEVK
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