| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3994 |
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| Symbol | |
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| ID | 5664378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4852314 |
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| End bp | 4853342 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238658 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001503839 |
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| Protein GI | 157963805 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCA ACACCGCTTT TATTCGCTCT TGCTATATCT CTCCGGTATT AGAGGGAGTA
GAGGCGCATT ATGGCGTGAC TTCTGATGAC CTAGGCATTC CTAAGCTGGT ACTCCAAGAT
AGGATGACGC TGATCCCTTT TACAGAGGTG TCAAAGTGGT TTGAACAGAT TGAGCGGATA
ACTGGCGAAA CTGATTTTAT GGTCAAGATC CAGAGTTACC TGACTCTAGA TGGGCTTGAA
ATCCCTGGGA ATTGGTTCTT AAGTGCCCCC GATCTAGCAA TGTCATTTAG GCGGATCAAT
CATGGGATCT GCAGCTTTCA ATCTGGCGCT AGCTATTACG CTCAACAGTC GGGAAAAATC
TTAAAGTGGT GCTACTGCAA TGATTTTGTA AAGGGAAAGC CACGTTCTCA TGATTCCCTA
AGAGTGGCTT TTACCCTATT TAACGCTATT AAAAACTACG TTGGCGATAG CTACAGCCTA
CGTAAAGTCA GACTCAGCGG TCCACCCGTT CAACAGAAGC AAACAGAAGA ACTCTTCGAT
TGCCCAGTGT CCTGGAATGC GCCACAAACT GAGCTGTGGC TCGGTATCGA CAGCCTGCTT
ATGTCCACCG ACGATTACAG TTACATCCCA GAGCCCCTGA CCGCATCGAT TCCGCTGTCT
CAACTAGAAA AGTATCTGAA TATGCCGCAA CCAACAGATC AGCCAAAAGT TTTGTATGAG
ATGGTGAATT ACTCACGCTA TTACGGTTTA CCCAGCGTAG ATTCGGTGGC TGCGCTGTTT
GGGATCTCTC GCCAACAGCT GCAGCGGCGA CTGCAGAAAC TCGGGTTCAC CTTTACCTAT
CTATCAGGCT ATATTCTGTG TAATCAGGCA ATTAAATATA TGTTGGAGGG GATGAATGTG
GCTGAGATTG CGACACGTTT AGGCTATGCC AATTCACATA GCTTTAGTCG CTCATTCACC
CGGTTTCGTC GTCAAACACC GACTCAATAT TTGCATAAGC TAAATCTAAA TAGCAAAAAG
CCTCTTTAA
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| Protein sequence | MLLNTAFIRS CYISPVLEGV EAHYGVTSDD LGIPKLVLQD RMTLIPFTEV SKWFEQIERI
TGETDFMVKI QSYLTLDGLE IPGNWFLSAP DLAMSFRRIN HGICSFQSGA SYYAQQSGKI
LKWCYCNDFV KGKPRSHDSL RVAFTLFNAI KNYVGDSYSL RKVRLSGPPV QQKQTEELFD
CPVSWNAPQT ELWLGIDSLL MSTDDYSYIP EPLTASIPLS QLEKYLNMPQ PTDQPKVLYE
MVNYSRYYGL PSVDSVAALF GISRQQLQRR LQKLGFTFTY LSGYILCNQA IKYMLEGMNV
AEIATRLGYA NSHSFSRSFT RFRRQTPTQY LHKLNLNSKK PL
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