| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3989 |
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| Symbol | |
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| ID | 5664373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4844691 |
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| End bp | 4847828 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238653 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001503834 |
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| Protein GI | 157963800 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA AAATTATCAG TGCCTCGATT AAACAGCGGG CGATGGTGTT AGTGCTTACT
GCGGTGATCG CCTTAATCGG CTATCAAGCG ATGCGCATGA CGCCACTGGA TGCACTGCCG
GATCTGTCTG ATGTACAGGT TATCGTCAAG ACTTCCTACC CAGGGCAGGC GCCGCAGTTG
GTGGAAGATC AGATAACCTA TCCCTTATCC ACCGCCATGC TGGCGGTACC GGGTGCGCAA
ACCGTACGTG GTTTCTCCAT GTTTGGTGAC TCCTACGTCT ACATTATTTT TGAAGATGGC
ACCGACATCT ATTGGGCGCG CTCGCGGGTA TTAGAATACC TTTCCCAGAC TCAAGGCCAA
CTCCCCGATA GCGTCACGCC AACCTTAGGT CCTGACGCAT CTGGGGTGGG CTGGGTGTTC
CAATATGCCT TAGTCGACCG TAAGGGTAAA CATGACTTAG CCCAACTACG CTCGTTGCAG
GATTGGTTTT TAAAACTGGA ATTGCAAAGC GTTGAAGGTG TGTCAGAGGT GGCCACTATT
GGCGGCATGG AACAGTCTTA TCAGATCATC GTCGATCCTC ATAAGTTGGC GCTGTACCAG
ATTGATTTGA TGACGGTAAA AAATGCCTTA GATAACTCTA ACAGCTCTAC TGGCGGCTCG
GTTATCGAGA TGGCTGAAGC CGAGTATATG ATCACCTCCA GCGGTTACCG CCAGACTTTG
GCTGACTTTG AGGAGATCCC ACTGGGTATA GTGTCAGAGT CTGGCACGCC GGTATTGATG
AAGGATGTGG CACAACTGCG TACAGGCCCT GCCGCACGCC GTGGTATTGC CGAGCTTAAC
GGCGAAGGCG AAGTGGTTGG TGGTATCGTG GTTATGCGCT ACGGCGAGAA TGCCCTTGCC
ACCATCAACA ATGTGAAGCA GAAACTCAAA GAGATAGAAA ACGGTCTACC CGACGGGGTT
GAATTAGTGA TCACTTACGA TCGCTCTGAG CTCATTCTCA ATTCGGTAGA CAACCTCAAG
CACAAGGTGC TTGAGGAGAT GCTTGTGGTC GCAGTGATCT GCCTTATCTT CCTGCTTCAT
GCTCGCTCGA CATTAGTGGC CATCATCTCG CTGCCGATCT CGATTCTCAT CAGCTTTATC
GTAATGAACA TGATTGGGGT CAACGCCAAT ATCATGAGCC TAGGTGGTAT TGCCATCGCC
ATTGGTGCCG TAGTCGACGC CGCCATTGTG ATGGTCGAGA ACACCCATAA ACACTTAGAG
CACTATCGAG AACAACATAA CGGTGCCACA CCTACGGGCG AAGCGCACTG GGAGCTGGTA
CGCAAGTCAT CGGTTGAGGT GGGGCCGGCA CTGTTTTTCA GTTTGCTGAT TATCACACTG
AGTTTTGTGC CCGTTTTTGC CCTAGAAGCG CAAGAGGGAC GCCTATTCCA TCCGCTAGCC
TATACCAAGA CCTTTGCCAT GGCGGCGAGT GCAATATTAG CCATCACACT GATCCCGGTA
TTAATGGGCT ATTTCGTTCG CGGTAAGATC CCCGATGAGC GTAAAAACCC CATTAGCCGC
TTCTTAATTG CGATTTACGA GCCCACGCTA CGTCTGGTGT TACGCTTTCC CAAGATCACT
ATCTTGCTAG CAATAGTGAC ACTTGCAAGC GCAGTTTACC CTATGACCAA GATGGGCAGC
GAATTTATGC CCGAGCTTGA AGAGGGGGAT CTGCTCTATA TGCCAACAAC CCTACCGAGC
GTCAGTGCTG GTAAGGCGGC CGAGATCTTG CAGCAAACCG ATAGATTGAT AAAAACCGTG
CCTGAAGTGA AGCGAGTATT TGGTAAGGTC GGCCGCGCCA TGACAGCAAC CGACCCCGCG
CCATTAACTA TGCTAGAGAC CACTATCATG CTTAACCCAA GGGACACTTG GCGCGAAGGT
ATGACACTAG AAGGCATCAT CGCGGAGCTA CAAAGAACCG TAAAAGTGCC GGGAATGACC
AATGCTTGGG TACAACCGAT CAAGACCCGT ATCGATATGC TCTCTACTGG GGTAAGAACC
CCTGTGGGTA TAAAGATATC CGGCGCAGAT ATTGAGGAGC TGCAACGCAT AGGGACTGAG
ATAGAAGCGG TAGTCAGTAA GCTACCGGGG ACAGAGTCCG CCTTCGCTCA ACGCACCAGT
GGCGGCCGTT ATATTGATAT CGAGCCCGAC CTTAAGAATG CCGCCCGTTA TGGAATGACG
CTCAAGGACA TTCAAGACGT GGTGCAGATG GCAATTGGCG GCATGCAGGT GGGGCAATCG
ATTCAAGGCC AAGAGCGCTA CCCTATCAAT ATCCGTTACC CGAGAGAATT ACGCGACAGT
ATTGAGAAAC TCGAAGATCT ACCGGTACTC ACAAAAACTG GTAAATACCT GCCTTTAGGT
AACCTTGCTA GCATTAGCAT CAGCGATGGC GCACCTATGC TAGCCAGTGA AAACGGCCGC
TTGATCAGCT GGGTATTTGT CGATTTGAAA GATATCTCTA TCGGTGAGTA CATCACTAGC
GCAAGAGCCG CACTAGATGA GCAGATCAGC TTGCCACCGC GCTACAGCTA TAGCTTTGCC
GGCCAATATG AGTATATGCA GCGGGTAGAA GCTAAGATGC AGCTAGTGGT GCCGTTAATG
CTAGCGGTTA TCTTCATGTT ACTCATGATG ACCTTTAGCT CATTTATCCA GGCATCGGTG
ATCATGCTAA GCCTACCTTT CTCACTGGTA GGTAGCGCTT GGTTACTCTA CTTTCTGAAC
TTTGACTTCT CCGTTGCCGT ATCTGTGGGG ATGATCGCGC TGGCGGGCGT GGCAGCCGAG
TTCGGCGTAG TGATGCAGGT TTATCTGAAT AACAGCATCA GGGATCGAAA ACTTGCAGGC
TTATACAATA AGCGCAGTGA CTTGAGCGAA GCCCTTATTC ACGGCGCGGT AATGCGTATT
CGCCCTAAAG CGATGACAGT GGCGACCATC TTCTTTGGAT TATTGCCAAT CATGTGGGGT
AGCGGCACGG GTAATGAAGT GATGCAGAAG ATTGCAGCGC CTATGGTGGG CGGCATGGTC
ACCGCTCCTA TCCTATCGCT GTTTGTGATC CCGGCGATCT ACTTGCTGAT TTACGGACGA
AAATTGACGA AAGACTAA
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| Protein sequence | MLEKIISASI KQRAMVLVLT AVIALIGYQA MRMTPLDALP DLSDVQVIVK TSYPGQAPQL
VEDQITYPLS TAMLAVPGAQ TVRGFSMFGD SYVYIIFEDG TDIYWARSRV LEYLSQTQGQ
LPDSVTPTLG PDASGVGWVF QYALVDRKGK HDLAQLRSLQ DWFLKLELQS VEGVSEVATI
GGMEQSYQII VDPHKLALYQ IDLMTVKNAL DNSNSSTGGS VIEMAEAEYM ITSSGYRQTL
ADFEEIPLGI VSESGTPVLM KDVAQLRTGP AARRGIAELN GEGEVVGGIV VMRYGENALA
TINNVKQKLK EIENGLPDGV ELVITYDRSE LILNSVDNLK HKVLEEMLVV AVICLIFLLH
ARSTLVAIIS LPISILISFI VMNMIGVNAN IMSLGGIAIA IGAVVDAAIV MVENTHKHLE
HYREQHNGAT PTGEAHWELV RKSSVEVGPA LFFSLLIITL SFVPVFALEA QEGRLFHPLA
YTKTFAMAAS AILAITLIPV LMGYFVRGKI PDERKNPISR FLIAIYEPTL RLVLRFPKIT
ILLAIVTLAS AVYPMTKMGS EFMPELEEGD LLYMPTTLPS VSAGKAAEIL QQTDRLIKTV
PEVKRVFGKV GRAMTATDPA PLTMLETTIM LNPRDTWREG MTLEGIIAEL QRTVKVPGMT
NAWVQPIKTR IDMLSTGVRT PVGIKISGAD IEELQRIGTE IEAVVSKLPG TESAFAQRTS
GGRYIDIEPD LKNAARYGMT LKDIQDVVQM AIGGMQVGQS IQGQERYPIN IRYPRELRDS
IEKLEDLPVL TKTGKYLPLG NLASISISDG APMLASENGR LISWVFVDLK DISIGEYITS
ARAALDEQIS LPPRYSYSFA GQYEYMQRVE AKMQLVVPLM LAVIFMLLMM TFSSFIQASV
IMLSLPFSLV GSAWLLYFLN FDFSVAVSVG MIALAGVAAE FGVVMQVYLN NSIRDRKLAG
LYNKRSDLSE ALIHGAVMRI RPKAMTVATI FFGLLPIMWG SGTGNEVMQK IAAPMVGGMV
TAPILSLFVI PAIYLLIYGR KLTKD
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