Gene Spea_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3981 
Symbol 
ID5664365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4837891 
End bp4838520 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content47% 
IMG OID641238645 
Productputative methyltransferase 
Protein accessionYP_001503826 
Protein GI157963792 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0470106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAAA AAAGACCTTC TAGCGGTCAA GTTAGGATTA TTTCAGGCCA GTGGCGCTCT 
CGAAAGTTGC CCATTCACGA CCTTGAAGGG CTACGCCCAA CCACAGATCG CGTTAGAGAA 
ACGCTGTTCA ATTGGATTGC TAACGATGTG CGCGGTTCCC GCGTACTCGA CTGCTTTGCT 
GGTAGCGGTG CATTAAGCCT TGAGTCACTG TCACGATATG CCAGCTACGC CAAGATTTTC 
GAGCTTCAGG CTCAAGCGGC GAAACAGCTT ATAGCCAACC TAGCCACATT AAAATGCGAT 
AACGCAGATG TCATCAAGGG TGACAGCCTA GCGTTACTGG CGAATAAGCC AAGCGAAGGC 
TTCGATCTAG TCTTTATCGA CCCGCCTTTT AGAAAGTCAC TGGCAGAGAA AAGCATTAGC 
CTTATCGATC AGCACCAATG GCTAAACCAT GATGCGCTGA TCTATGTGGA AACAGAGAGT 
GAAATATCGC TGCTTAACGT ACCTGCTAGC TGGGCATTAC TGAAAGAGAA AAAAGCAGGC 
CAAGTGATCT ACCGTTTATA TCAGTATTCA GCTGAAGCGG TTATTGAAGA GCTTAATGGC 
ACGAGTCGCG ATACAGAGGA AACAAACTAA
 
Protein sequence
MVKKRPSSGQ VRIISGQWRS RKLPIHDLEG LRPTTDRVRE TLFNWIANDV RGSRVLDCFA 
GSGALSLESL SRYASYAKIF ELQAQAAKQL IANLATLKCD NADVIKGDSL ALLANKPSEG 
FDLVFIDPPF RKSLAEKSIS LIDQHQWLNH DALIYVETES EISLLNVPAS WALLKEKKAG 
QVIYRLYQYS AEAVIEELNG TSRDTEETN