| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3980 |
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| Symbol | |
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| ID | 5664364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4835734 |
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| End bp | 4837665 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238644 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001503825 |
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| Protein GI | 157963791 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00176908 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT TTCCTGGTTC CGCAAGGATA AATCTAAAGA AGAAGCGCAG
GCTGCTGAAG CGGCGAAACT AGAAGCTGAA AAGCTTGAAC TTGAAAGAAT CGAAGCTGAG
CGTTTTGAGG TAGAAAGAGT CGCAGCCGAG CAGGCCGAAG CTGCACGCAT TGAGGCCGAG
CAAGCTGAAG CTCAGAGATT AGCAGATGAG CAAGCGGCTC AGGTTGAAGC TCAGAGATTA
GCGGATGAGC AAGCGGCTCA GGTTGAAGCT CAAAGAGTTG CAGCAGAGCA GGCTGAAGCC
CAGAGATTAG CAGGTGAGCA AGCGGCTCAG GTTGAAGCTC AAAGAGTTGC TGCTGAGCAG
GCTGAAGCCC AGAGATTAGC TGATGAGCAA GCAGGTCAAG CCGAAGCTCA AAGAATTGAA
GCCGAACGCC TTGAATCTGC ACGTATCGAA GCAGAACAGG CTCGTTTAGC CGCTGAGCAA
GCCGAACAAG CACGCTTGGC AGCAGGGCAG GCTGCTCAAG TTGAAGAGGA ACGTCTTGAA
TCTGCACGTA TCGAAGCAGA TAGAGTCGCA GCTGAACAAG CCGCACAAGC AGCTCAAGCC
GAAGCTCAAA GAGTTGAAGC TGAACGTATC GAAGCTGAAC GTCTTGAAGC AGAAAGAGTT
GCAGCAGAAA GAGTTGTAGC AGAACAGGCT CGTTTAGCAG CTGAGCAAGC AGAAGCTGTG
CGTATCGAGC AAGAACGCCT AGAAGCTGAA CGTCTTGAAT CAGAAAGAGT CGCAGCAGAG
CAGGCTCGTT TAGCAGCTGA GCAAGCAGAA GCTGCGCGTA TCGAGCAAGA ACGCCTAGAA
GCTGAACGTC TTGAATCAGA ACGTCTTGAA GCAGAAAGAA TTGCAGCAGA ACAAGCCGAG
GCTCAAAGAG TCGAAGCAGA AAGAATTGCA GCAGAAGCCG CTGCACAGCA AGCAGAAGAG
CAACAGCCAG AGCCACAGGC TAAGCCAGTA AAAGAAGGTT TGTTTGCCCG TCTTAAGCGT
GGCCTAAAGC GTACCAGTGA GAGTATTGGT AGCGGCTTTA TTGGGTTGTT TAGCGGTAAG
AAGATCGATG ATGATCTTTT TGAAGAGTTA GAAGAACAGC TATTGATCGC CGATGTGGGC
GTCGAAACGA CCACACGTTT GATTAAGAAC CTAACTGAGC AGGCAAGCCG TAAGCAGCTA
AAAGATGGTG AAGCGCTATA CGATCTTCTA CGTGAAGAGA TGCAAAAGAC GCTAGACCCT
GTATCTGTGC CACTGATCCC TGAAAATGCC GATGGTCCAT TTGTGATCTT AATGGTGGGT
GTGAATGGTG TGGGTAAAAC CACCACCATT GGTAAGCTGG CTAAACAGTA TCAGGAACAA
GGTAAGTCGG TGATGTTGGC TGCGGGTGAT ACCTTCCGTG CCGCCGCTGT TGAGCAGCTG
CAAGTTTGGG GTCAACGTAA CGATATTCCG GTTATTGCCC AGCATACTGG TGCTGACAGT
GCATCAGTGT TATTTGACGC ATTACAAGCG GCTCGTGCTC GTAATGTTGA CGTACTGATT
GCCGATACAG CTGGTCGTTT GCAGAACAAG GCTCATTTGA TGGACGAACT GAAGAAAGTT
GTCCGTGTGA TGAAGAAGCA AGATGAAGCT GCCCCGCACG AGGTGATGTT AACCTTAGAT
GCGAGCACAG GTCAGAATGC GATTAGCCAG GCGCAACTGT TCCAAGAGGC TGTAGGTGTC
ACGGGTATTA CTATCAGTAA GCTAGACGGT ACTGCTAAGG GCGGAGTGAT CTTTGCTATT
GCGGACAAGT TTGGTATTCC AATTCGTCAT ATCGGTGTTG GTGAGCAGAT CGACGACTTA
CGTACGTTCG ATGCTAAAGA CTTTATCGAA GCCTTGTTTA GCCAAACAAA AGACGACAAA
GACGCCAAAT AA
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| Protein sequence | MAKKGFFSWF RKDKSKEEAQ AAEAAKLEAE KLELERIEAE RFEVERVAAE QAEAARIEAE
QAEAQRLADE QAAQVEAQRL ADEQAAQVEA QRVAAEQAEA QRLAGEQAAQ VEAQRVAAEQ
AEAQRLADEQ AGQAEAQRIE AERLESARIE AEQARLAAEQ AEQARLAAGQ AAQVEEERLE
SARIEADRVA AEQAAQAAQA EAQRVEAERI EAERLEAERV AAERVVAEQA RLAAEQAEAV
RIEQERLEAE RLESERVAAE QARLAAEQAE AARIEQERLE AERLESERLE AERIAAEQAE
AQRVEAERIA AEAAAQQAEE QQPEPQAKPV KEGLFARLKR GLKRTSESIG SGFIGLFSGK
KIDDDLFEEL EEQLLIADVG VETTTRLIKN LTEQASRKQL KDGEALYDLL REEMQKTLDP
VSVPLIPENA DGPFVILMVG VNGVGKTTTI GKLAKQYQEQ GKSVMLAAGD TFRAAAVEQL
QVWGQRNDIP VIAQHTGADS ASVLFDALQA ARARNVDVLI ADTAGRLQNK AHLMDELKKV
VRVMKKQDEA APHEVMLTLD ASTGQNAISQ AQLFQEAVGV TGITISKLDG TAKGGVIFAI
ADKFGIPIRH IGVGEQIDDL RTFDAKDFIE ALFSQTKDDK DAK
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