| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3965 |
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| Symbol | |
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| ID | 5664349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4819335 |
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| End bp | 4820276 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238629 |
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| Product | polysulphide reductase NrfD |
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| Protein accession | YP_001503810 |
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| Protein GI | 157963776 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCAT TCCATTTTGA CAGCCTAACT TGGCCATGGC CAATTGCCAT CTACCTATTT
CTTGCGGGTA TATCGGCCGG AGCCATCTGC TTTGCTGTAT TGCTAAAACA CTTTAAATTG
GGACGTGATG CCTATAAATC AGGCTTTGTC CAGGCGGCTT GTCTTATTGC ACCGTTGGCT
GTATTTGCAG GGCTTGGCAT TTTAGTTATC GATTTAACTA AGCCGTTCGA TTTTTGGAAG
ATCTTAGTGT TCTACAACCC GACTTCTGTG ATGTCTGTTG GTGTCGCTGT ACTGATGGTC
TATCAGGTTG CACTGTTCGC TTGGTTAGCT TGTGTCTTTA AAGAGCCTGC GCTTTCTTGG
TGTAACGGTC GCTGGCCAGT TGTTGAGAAG TTATTTAGTG CAATCGCTAA GCATGAAGCA
AGCATTACAG GCTTCTTGGT GATCCTTGCC TTGTCATTAG GTGCATATAC TGGCTTCCTG
CTATCGGCAT TAACGACTTA TCCAATGCTA AATAATCCGG TATTGCCTTT GCTGTTTTTG
GTCTCAGGGC TTTCATCGGG AGCTGCGGGG ACTCTACTCG GCGGCGTATT GCTCAAAGGT
AATCCTGATG GTAAGGAAGT GCACTTTATC CACAATATTG AGATCCCAAT GATTTTGGTG
GAAATTGTGC TTATCTTCAC CTTCTTTACA GGCTTGATTT TAACTGGAGG CCAGAGCCAA
GTGGCTGCAT TTGCTGCAAT TGGAGAAGGC TTCTGGGGCT GGATATTCTG GGCTGGTATC
GTTGTTGTTG GTTTGAGTAT GCCACTGGCC TTTAACCTAT TTATGAAAGC CTCCTCTAAG
CGCAAGTTCT CTTATGTGGC GATTACTGCC AGCTGCAGTT TAATCGGCGT ACTTTTACTG
CGTAACTTCA TTCTTTATAC CGGCCAAATG ACGGTTGCTT AA
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| Protein sequence | MSPFHFDSLT WPWPIAIYLF LAGISAGAIC FAVLLKHFKL GRDAYKSGFV QAACLIAPLA
VFAGLGILVI DLTKPFDFWK ILVFYNPTSV MSVGVAVLMV YQVALFAWLA CVFKEPALSW
CNGRWPVVEK LFSAIAKHEA SITGFLVILA LSLGAYTGFL LSALTTYPML NNPVLPLLFL
VSGLSSGAAG TLLGGVLLKG NPDGKEVHFI HNIEIPMILV EIVLIFTFFT GLILTGGQSQ
VAAFAAIGEG FWGWIFWAGI VVVGLSMPLA FNLFMKASSK RKFSYVAITA SCSLIGVLLL
RNFILYTGQM TVA
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