| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3956 |
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| Symbol | |
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| ID | 5664340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4810554 |
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| End bp | 4811756 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238620 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001503801 |
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| Protein GI | 157963767 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGTA GTTTGTTACC CATTTTGTTG CCAATGGTGA TTTTAAGCCC GTTGGCTATC
GATATTTATC TCCCCTCTAT GCCTACAATG GCAGCGGAGT TTGCTGTATC AGCTAGCGAA
ATCCAATCGA CGTTAGTACT CTTCTTGTTT GCCATGGGCA CTGGCCAGTT ATTGATTGGT
CCACTGGCGG ATCGCTATGG TCGCCGACCT ATTGCCATAG GTGGCATCAT CTTTTATATG
ATTAGCAGTC TATTGGCCGC TATTGCAGTA GAGTTTCATT GGCTGCAAAT TGCTCGAGTG
ATGCAAGGCT TAGCCGCTTG TTCCACCTCT ATCGTGGTAT TCAGTGCGGT GCGGGACTGT
TTTTCACCCA AAGAGAGCGC TCGTTACTAC AGCTATCTTA ACGGTATGAT CTGTATTATT
CCCGCGTTAG CACCGACCTT GGGCGGCATG CTGGCGCTGC AATTTGGCTG GCGTTCAAAC
TTCATCTTTA TGGCCTTGTA TGGCCTAGTT ATTCTGGCTT TAGTGAGCCT GCGTCTACCT
GAAACTCGCC CACAGAATAC CATCAGTGAC GGGCCACTAT ACCGCTGGGC GCGTTATAAG
CCGGTGATTA CTGAGCCGCA CTTTGTGTTT TATGCCATCG CTTGTATGGC GGGTATGGCT
GCAATCCTGA GTTATGTGTC TTACGCACCT GTGTGGCTTA TCGGTCACTT GGGTGTATCA
GAGTTAACTT TCAGTGGCCT ATTTGGCTTA AACGCGGCCG TGAATATCGT TGCCTGTTTT
GCCGCACCAC TAGTGATTAA AAAGCTGGGC AACCGACCAA CCGTTATTGC TGCGTTAATC
TTGATGCTAG CGTCTGCAGT CACTCAGGTT ATTGTGCAGT TGGTGGGTCC GCAGTCAGGC
TTGATGGCAG CGTATAGCTA CATGTTACCT ATGATGCTGC TCTGTATCGG CTTTGCCTTA
CTACTCGGCC CAGCAACCAG TATGGCGCTT TCGGCCTTTG GCGAAAGAGC GGGTACGGCA
ACAGCAATGC TTGGTTTCAT TCAGATGAGT GGCGCCTCAC TGCTGACGGC ACTTATCCAG
CAGACGAGTC TGCCTGCTCC GTATGCGGTA GCGGCCTTGA TGGGCGTGGG AGCGATTGCA
TTACTTGCCA TGATGGCTAT GCCTAAGTTT GACCATTGGC ACCAAGAGCA ACACGCTTAC
TAG
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| Protein sequence | MRRSLLPILL PMVILSPLAI DIYLPSMPTM AAEFAVSASE IQSTLVLFLF AMGTGQLLIG
PLADRYGRRP IAIGGIIFYM ISSLLAAIAV EFHWLQIARV MQGLAACSTS IVVFSAVRDC
FSPKESARYY SYLNGMICII PALAPTLGGM LALQFGWRSN FIFMALYGLV ILALVSLRLP
ETRPQNTISD GPLYRWARYK PVITEPHFVF YAIACMAGMA AILSYVSYAP VWLIGHLGVS
ELTFSGLFGL NAAVNIVACF AAPLVIKKLG NRPTVIAALI LMLASAVTQV IVQLVGPQSG
LMAAYSYMLP MMLLCIGFAL LLGPATSMAL SAFGERAGTA TAMLGFIQMS GASLLTALIQ
QTSLPAPYAV AALMGVGAIA LLAMMAMPKF DHWHQEQHAY
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