Gene Spea_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3947 
Symbol 
ID5664331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4799885 
End bp4801330 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content49% 
IMG OID641238611 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001503792 
Protein GI157963758 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC AGATCGCAAG GTTGATGCAA CCCAAAAAAT TACTGACGGC AATGGCCGTT 
GCCAGTTCGC TGGCATTAGC GGGCTGTGCG GCAACGCAGA CCTCAAAGAC AGTCGATACT
GGCAGTTTTA GCGTGCCAGC CTATCAAAAG GTGACCCTGT CTAACGGCTT AACTGTGTAT
ATGATGCCTC AACATGAAGT ACCGCTGATC ACCGTCGACG CTATCGTACG AGCGGGAGCT
GTGAATGACA CTACCGCGGG GGTGGCGGAG ATGACCGCCA CAGGTCTAAT GTTAGGAGCT
GGTGGTAAGA GCAAGCTTGA GATAGAGCAA GAGGTGGATT TCTTAGGTGC CAGCCTAAGC
AGTGGTGCAG GAAAAGAGGG CAGTTATATC AGCAGCGATT TTATGGCGAA AGATGCCGAC
AAAATGCTGC CATTGATTAA GGATATGCTG GTCTCGCCTG ATTTTGACGC CACAGAGTTT
GATAAATTAC GTCAGCGTGA AATCGCCGGA TTATCTCAGG CCAAAGAGAG CCCTAGAGCG
GTGATTAGTC GCTACTTCGA TAAGTTGGTT TTTGCTGAAC ACCCCTACGG TAATGCCACA
TCGGGTAACA GCGAATCGCT AGCCGAGCTA ACAATCCCAC AATTGCGCGC CTTCCATAAG
AGCTACTATC AGCCATCGAA TACTGCCATT AGCGTGGTGG GGGATTTTGA GCCTGCTCAG
ATGAAGGTCA AGCTAGAGAA GCTGTTCTTA AATTGGCAAG ACTCTGAGCC AGTTACCTTA
GTCGATCTAT CAAAGGATCT GCCTAAGTTT GATGAAGCCG ATGTACTGTT AGTGGACAAG
CCTGACGCCA TCGAAACGAC TTTCTTGATT GGTGGCATGG GCATTAGCCG TGACAACCCA
GATTTTGTTG GGCTGACGGT AGTAAACACT GTACTTGGTG GGCGCTTTAC CTCATGGCTG
AATGATGAGC TGCGAGTTAA TGCAGGGCTA ACCTATGGCG CTCGCTCAGG CTTTAGTGCT
TATTCCGCGG CAGGTACCTT TAAGATCAGT ACCTTTACCC AAACGGTCAC CACTAAAGAA
ACCATTGACC TTGCGCTGAA GACTTACGCA AGACTGTGGC AACAAGGCTT AGATCAGGCG
ACCTTGGATT CGGCCAAGGC CTATGTGAAA GGGCAGTTTC CGCCTAAGTA TGAGACCAGC
GGCCAGCTAG TAGGGCTGAT GACAGATATG TATCTGTATG GTTTCGACGA TGCCTTTATC
AATGAGTTTC AGGCTAAGGT CGACGGTTTA ACCTTAGAGG AGTCTAAGCG GTTAATCGAC
ACTTACTTCC CGAAGCAAAA TCTACAGTTT GTCATCATAG GTAACGCGGC AAAGATAGCG
CCAATAGCCA AGGAGCATGG CAAGGTAAAG CAAGTGAGCA TCACAGAAGT GGGCTTCGGT
GGCTAA
 
Protein sequence
MKTQIARLMQ PKKLLTAMAV ASSLALAGCA ATQTSKTVDT GSFSVPAYQK VTLSNGLTVY 
MMPQHEVPLI TVDAIVRAGA VNDTTAGVAE MTATGLMLGA GGKSKLEIEQ EVDFLGASLS
SGAGKEGSYI SSDFMAKDAD KMLPLIKDML VSPDFDATEF DKLRQREIAG LSQAKESPRA
VISRYFDKLV FAEHPYGNAT SGNSESLAEL TIPQLRAFHK SYYQPSNTAI SVVGDFEPAQ
MKVKLEKLFL NWQDSEPVTL VDLSKDLPKF DEADVLLVDK PDAIETTFLI GGMGISRDNP
DFVGLTVVNT VLGGRFTSWL NDELRVNAGL TYGARSGFSA YSAAGTFKIS TFTQTVTTKE
TIDLALKTYA RLWQQGLDQA TLDSAKAYVK GQFPPKYETS GQLVGLMTDM YLYGFDDAFI
NEFQAKVDGL TLEESKRLID TYFPKQNLQF VIIGNAAKIA PIAKEHGKVK QVSITEVGFG
G