| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3940 |
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| Symbol | |
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| ID | 5664324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4789486 |
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| End bp | 4790418 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238604 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503785 |
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| Protein GI | 157963751 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAG AAGAGATCTA TCGCCAAGAT CTAAGCCTGC TTATTGCACT ACAAATTTTG
GTAGAAGAAC GCAGCGTGAC TCAAGCGGCT AAGCGCTTAC ATTTGAGCCA ATCTGCAACC
AGTCGCATTC TTGCGCGCCT TAGAGATATG CTCGACGATC CGCTGTTCTC TCGTGTGGGT
CAGCAGCTTG TACCAACCTC ATTTGCACTC GAATGCTACC AACAGTTGCG CCAACCCACG
GGCCAACTCA TTGAATTACT CACGCCTAAA GCCTTTGTGC CACAAGAGTG TCAGCAGCAG
TTTTCTATCG CAGTGACCGA TTATGCCATG CAGGCATTAA TCCCTTTCAT TCTGCCAATC
ATCTATAAAA AGGCACCACA GATCCGCCTC GAAATTGTGC CAGTACAGCA AAAAGAGTTA
CAGGCACAGC TCAGTGTGAA AGGCGCAGAT ATGGCCGTTT GTAGAGCAAT AGGTCAGACA
GGAAATTTAC AGCAGACATT TCTCGGCAAA GTGGGAGTCA GCTGTTTATT GTCACCCAAC
CACCCACTGG CAAATAGCGA TATCACTCTC GATGATTATC TGCATTACCC CCATGCCACC
ATTGCCATCA GTGATGGAGT GAAAGCCCTG CTCGACGATG CCATAAGCCT ATATCCAGCG
CGTACCGAAC TATTACGCAC CCCACATCTG GATACTGCGC TGGCGTTGCA ATCGGTTAAT
CCGCTGATTA TTACCCTACC AGAAGGCATG GCCGAAATCG CCGCCCAGCG ACATAAGCTC
AAGGTAAAGC CTCTACCGTT TAAGCTGCAA AGTTTAGACT ACAAGTTGTT CTGGCATTCG
CGCTGCGATC AAGACAAGGC GCAGAAATGG TTACGTGAAG AGATAGCAAC AGCGATCCAA
GAGTTGTTAT CGCAGACACC GCAAAATCTT TAA
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| Protein sequence | MELEEIYRQD LSLLIALQIL VEERSVTQAA KRLHLSQSAT SRILARLRDM LDDPLFSRVG
QQLVPTSFAL ECYQQLRQPT GQLIELLTPK AFVPQECQQQ FSIAVTDYAM QALIPFILPI
IYKKAPQIRL EIVPVQQKEL QAQLSVKGAD MAVCRAIGQT GNLQQTFLGK VGVSCLLSPN
HPLANSDITL DDYLHYPHAT IAISDGVKAL LDDAISLYPA RTELLRTPHL DTALALQSVN
PLIITLPEGM AEIAAQRHKL KVKPLPFKLQ SLDYKLFWHS RCDQDKAQKW LREEIATAIQ
ELLSQTPQNL
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