| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3929 |
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| Symbol | |
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| ID | 5664313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4777107 |
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| End bp | 4778147 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238593 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001503774 |
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| Protein GI | 157963740 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAA ATTTATTGCT CAATCATTTA GTAACGGCGG TGCTCGTTAT CAATGAAGAG
CTTGAGTTAC TCTATGTCAA TACTGCTACC GAGCAATTGC TCGGTGTCGG CAGCAACCGA
CTCACAGAGC AACCCTTACC CGAGCACTAT CAGTTACTCG GCGTCGACCC TCAAGTCCTA
AAGCTCGCCA TCTGCGACGG CCAAGGCCTG AGCATCAATA CCGTGCCTTT AGTGACCATA
GATGGCCAGC ACCATACCGT CGATGTCACC CTGACACCGC TTGAACAAGA AAAGAATCTA
GCCCTGATTG AGCTTCGCCA AGTCGATCAA CAGCGACGCA TTCACCAACA GTTAACCCAA
GATGCTCAGC AGCAAGCGGC GCAATACTTA GTGCGTAATC TTGCTCATGA GATTAAGAAT
CCATTGGGTG GATTACGCGG CGCGGCGCAG CTATTGTCTC GCGAACTAAA AGACCCCGAG
CTCAACGAAT TTACCGATCT TATTATCGAG CAGGCCGACA GACTGCGTAA CTTAGTCGAC
CGCTTACTCG GCCCACAGAA GCCGACCCAG CATAGCCTTT ACAATATTCA TGAAGTGATC
CAAAAGGTGC TCAAGCTGGT AAATGTTACC CTGCCTGACA ATATTGAATT GACCCAAGAT
TACGACCCAT CCATCCCTGA TATCGAGATG GATCCGGATC AACTGCAGCA GACCATTCTT
AATATCGTAC AAAACGCGGT ACAAGCCTTA GAGCCAAGCG GCGGTCATAT TCGCCTAAAG
ACCCGTACTC AACATCAAGT CACCATAGGT ACCAAGCGCC ACAAGTTGGT GCTTATGCTG
TCGGTGATAG ACGACGGCCC GGGCATTCAA CCTGAGCTTA TGGATACTTT GTTTTATCCT
ATGGTCACAG GCCGAGAACA AGGCTCTGGA TTGGGCTTAT CCATCGCCCA TAACTTTGCC
CGCTTGCACG GTGGTCGCAT CGATTGTGAC TCAACAGTCG GCCACACAGA ATTTACCATT
ACCCTACCCA TCAATAATTA A
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| Protein sequence | MDTNLLLNHL VTAVLVINEE LELLYVNTAT EQLLGVGSNR LTEQPLPEHY QLLGVDPQVL
KLAICDGQGL SINTVPLVTI DGQHHTVDVT LTPLEQEKNL ALIELRQVDQ QRRIHQQLTQ
DAQQQAAQYL VRNLAHEIKN PLGGLRGAAQ LLSRELKDPE LNEFTDLIIE QADRLRNLVD
RLLGPQKPTQ HSLYNIHEVI QKVLKLVNVT LPDNIELTQD YDPSIPDIEM DPDQLQQTIL
NIVQNAVQAL EPSGGHIRLK TRTQHQVTIG TKRHKLVLML SVIDDGPGIQ PELMDTLFYP
MVTGREQGSG LGLSIAHNFA RLHGGRIDCD STVGHTEFTI TLPINN
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