Gene Spea_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3927 
Symbol 
ID5664311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4775404 
End bp4776048 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID641238591 
Producthypothetical protein 
Protein accessionYP_001503772 
Protein GI157963738 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAT ACATTTTTAC AAGCTGGCTA ATCTTACTGA CAGCCTGCAG TACTGTGGCG 
GATCAAAAAA CGGAGGCAAC GAAAGATCAG CCTGTTAAGG ACGAGACTCA CGCAACGATT 
ACTCCGAGTT TCGATTGCGC AAAGGCACAA GGGAAAGTTG AAACCCTGAT TTGTGATGAC 
GCAGAGTTAG CTAAGTTAGA TAGAGAGATG GCTCAGGTAT ACCAACAAGC CATGGTAAAT 
ATTCCGCCGT CCGCGCAGCC TAAGGCGACA CAAAGAGGTT GGATTAAGGG GCGTAATGAT 
TGCTGGAAGG CGCAGGATGT ACGTCAGTGC ACGCTAGATA ATTACCAAAT CCGCCTTATT 
GAGTTGCAAA TTCAAGGTCG TTTAATTGAG CCTTCTAGCA CAGCAGTTTT TGATTGTGGT 
AATCGACCAC AGATAAGCGC TGTTTTTTAT ACCCAAGTGG ATCCTGTTAC GGCGGTATTT 
ACCTTTTCGA GTGAGAAAAT GGGCGATCAG CAACTGTTAG CGACCAATGT ACGCAGTGGC 
AGTGGCGCTA AATACCTAGG GCGTAACTTT GAGTTTTGGG AGCATCAGGG CGAAGCAAGC 
GTGCAGTTCT TTGATCACAG CTATAAGTGT AAATTACTCA AATAG
 
Protein sequence
MHKYIFTSWL ILLTACSTVA DQKTEATKDQ PVKDETHATI TPSFDCAKAQ GKVETLICDD 
AELAKLDREM AQVYQQAMVN IPPSAQPKAT QRGWIKGRND CWKAQDVRQC TLDNYQIRLI 
ELQIQGRLIE PSSTAVFDCG NRPQISAVFY TQVDPVTAVF TFSSEKMGDQ QLLATNVRSG 
SGAKYLGRNF EFWEHQGEAS VQFFDHSYKC KLLK