| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3894 |
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| Symbol | |
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| ID | 5664278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4740218 |
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| End bp | 4741780 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238558 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001503739 |
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| Protein GI | 157963705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG ATAATACCTA TAACCTTAGC CAGCAAACCG TTGAATTTGG CTATAACAGC
CTATCGCTTG AAGATGTGGT GGCTATCGCC AAAGGCGCAA CAGCCAAGCT GAATCAAACG
ACCGAATACC GCAGCTATAT TCAAAAAGGC GCGCTGTTTA TCGATAGCCT GCTTAAAGAA
GAGGGCGTGG TTTACGGCGT CACTACAGGT TATGGTGATT CTTGTACTGT CACTGTGGGT
CTTGACTTGG TTCATGAGCT ACCGCTGCAC CTGACTCGTT TTCATGGCTG TGGTATGGGT
GAGATCCTGT CGCCGATGCA AGCTCGCGCC GTGATGGCAT GCCGACTTAG CTCGCTAGCT
GTCGGTAAAT CTGGGGTCAC TTTCGAGCTA CTTGAGCGTA TCGAAACCCT GCTTAATCTT
AATATTACTC CGGTGATCCC CGAAGAGGGC TCAGTTGGCG CCAGTGGCGA CTTAACGCCA
CTATCTTATC TAGCAGCGGT ATTGATCGGC GAGCGCGATG TGATTTACCA AGGTGAACGA
CGCCCAACTA GCCAAGTGTA CCAAGAGCTT AATATCGTAC CGCTAAAACT TCGTCCGAAA
GAAGGCCTAG CGCTAATGAA CGGCACTGCG GTCATGACGG CGCTAGCTTG TTTAGCCTAT
GACAGAGCCC AGTACATGGC GCGTCTTGCC AGCCGTATCA CCGCCATGGC ATCACTGACC
CTTAAAGGTA ACTCGAATCA CTTCGACGAC ATCTTATTTG CCGCTAAGCC GCACCCGGGC
CAGAACCAAA TCGCTGCTTG GATCCGTGAA GACTTGAATC ATCATATTCA TCCACGTAAC
TCCGACAGAC TGCAAGACAG ATACTCTATC CGCTGTGCAC CCCATGTGAT TGGTGTGCTA
CAAGACGCGC TGCCGTTTAT GCGTCAGTTT ATTGAAACTG AACTCAACAG CGCCAACGAC
AACCCAATTG TTGATGGTGA AGGCGAGCAT ATTCTACATG GCGGTCACTT CTATGGCGGC
CACATCGCCT TTGCCATGGA TGCGATGAAA AATGCGGTAG CCAATATTGC CGATCTTATC
GATCGCCAGA TGGCATTAGT CATGGATCAG AAATTCAATA ACGGTTTACC GGCCAACTTA
TCGGGCGCTC AAGGCAGACG TAAGGCGATT AACCACGGCT TTAAAGCGGT GCAGATTGGC
GTATCCGCGT GGACGGCTGA AGCCCTGAAA AACACCATGC CAGCCAGCGT GTTCTCACGC
TCTACCGAGT GCCATAACCA AGATAAGGTC AGCATGGGCA CCATCTCGGC TCGTGATTGT
ATGCGCGTAT TACAACTGAC CGAGCAAGTC GCTGCGGCGG CGTTACTGGC CATGTCGCAA
GGTATTCGCC TGCGCATTGC TCAAGAGGAG CTCGTCGAAA GCTCGATTAC ACCTTCTTTA
GCCAATACCC TTGCTCAAGT TGAAGCCGAC TTTGAATTAT TAACTGAAGA TAGACCGCTA
GAGCAGACCC TACGCTCTAC CGTCGATAAG ATCCAAAATG GCTACTGGGA AGTGTGCGGT
TAA
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| Protein sequence | MTQDNTYNLS QQTVEFGYNS LSLEDVVAIA KGATAKLNQT TEYRSYIQKG ALFIDSLLKE
EGVVYGVTTG YGDSCTVTVG LDLVHELPLH LTRFHGCGMG EILSPMQARA VMACRLSSLA
VGKSGVTFEL LERIETLLNL NITPVIPEEG SVGASGDLTP LSYLAAVLIG ERDVIYQGER
RPTSQVYQEL NIVPLKLRPK EGLALMNGTA VMTALACLAY DRAQYMARLA SRITAMASLT
LKGNSNHFDD ILFAAKPHPG QNQIAAWIRE DLNHHIHPRN SDRLQDRYSI RCAPHVIGVL
QDALPFMRQF IETELNSAND NPIVDGEGEH ILHGGHFYGG HIAFAMDAMK NAVANIADLI
DRQMALVMDQ KFNNGLPANL SGAQGRRKAI NHGFKAVQIG VSAWTAEALK NTMPASVFSR
STECHNQDKV SMGTISARDC MRVLQLTEQV AAAALLAMSQ GIRLRIAQEE LVESSITPSL
ANTLAQVEAD FELLTEDRPL EQTLRSTVDK IQNGYWEVCG
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