Gene Spea_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3885 
Symbol 
ID5664269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4732994 
End bp4733857 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID641238549 
Producthypothetical protein 
Protein accessionYP_001503730 
Protein GI157963696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.442577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCA GTCAAGAAGA TAGAATTTCC CCACAGGAAA AAAGTTCTGG CACCAACGGT 
CTGGCAATTC TGGCTATAGT TGCCGTTGTA GCGCTATCTG CTGGCGGCTA CTACTACCTC
AGTGGTAACG AAAAAATCGA AGAGCCACAA ATCATTGCAC CAGTGGTGAT CCCCGATCCA
GTTCCGGAAC AGCCACTTGA AACTGAAGCC GTGCCAGAGC CCGAAATCGT CGAAGCCGTG
CCTGTTCAGC TACCTGAAGT GGAGCCAGTC CCCGAAGTTG AGCCACTACC CGCGCTAGCC
GATAGCGACA CCTATGTGCA GCAAAAAGTG ATCGAAGTTG CCGATGGTAT GGCGATTGAA
CCTCTGTTGA TTGAAGATAA TGTAGTACGT CAATTTGTGG TGTTCGTTGA TAACTTAGCG
CAAGGTGAGT TGGCGCGCAA AACGGCTCCT TTAAAGGCGC CTAGCAATAG CTTCACCGTA
TCGGAAATTG CCAATAAGAC CTATATCAAC CCAGACAGTT ACCACAGATA TGACCTGTAC
GCCGACTTCC TAGCAAGCTT AAATGACCAA GAGCTCGCTA AGACCTACAA AGAGATGACG
CCGCTACTCG GTGAAGCCTT TGCAGAGCTA GGCTACAGCG ATATTTCGTT TGATGATCGC
ATGCAGCAAG CCATCGAAGT CATGTTAGAT GCGCCGATTA TCGAGCAGCC AATTGAGCTA
GACGGTGTCA GCGTTAACTA TCAGTTTGTC GACCCTAAAC TAGAAGCACT GCCTAATGCG
CAGAAGCTGA TGATCCGCAT GGGTCCTGAA AACTCACGTA AGGTAAAGTC GGCACTACGC
CGCCTACAAA AACATCTTAA CTAA
 
Protein sequence
MQLSQEDRIS PQEKSSGTNG LAILAIVAVV ALSAGGYYYL SGNEKIEEPQ IIAPVVIPDP 
VPEQPLETEA VPEPEIVEAV PVQLPEVEPV PEVEPLPALA DSDTYVQQKV IEVADGMAIE
PLLIEDNVVR QFVVFVDNLA QGELARKTAP LKAPSNSFTV SEIANKTYIN PDSYHRYDLY
ADFLASLNDQ ELAKTYKEMT PLLGEAFAEL GYSDISFDDR MQQAIEVMLD APIIEQPIEL
DGVSVNYQFV DPKLEALPNA QKLMIRMGPE NSRKVKSALR RLQKHLN