Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3885 |
Symbol | |
ID | 5664269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4732994 |
End bp | 4733857 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238549 |
Product | hypothetical protein |
Protein accession | YP_001503730 |
Protein GI | 157963696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.442577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTCA GTCAAGAAGA TAGAATTTCC CCACAGGAAA AAAGTTCTGG CACCAACGGT CTGGCAATTC TGGCTATAGT TGCCGTTGTA GCGCTATCTG CTGGCGGCTA CTACTACCTC AGTGGTAACG AAAAAATCGA AGAGCCACAA ATCATTGCAC CAGTGGTGAT CCCCGATCCA GTTCCGGAAC AGCCACTTGA AACTGAAGCC GTGCCAGAGC CCGAAATCGT CGAAGCCGTG CCTGTTCAGC TACCTGAAGT GGAGCCAGTC CCCGAAGTTG AGCCACTACC CGCGCTAGCC GATAGCGACA CCTATGTGCA GCAAAAAGTG ATCGAAGTTG CCGATGGTAT GGCGATTGAA CCTCTGTTGA TTGAAGATAA TGTAGTACGT CAATTTGTGG TGTTCGTTGA TAACTTAGCG CAAGGTGAGT TGGCGCGCAA AACGGCTCCT TTAAAGGCGC CTAGCAATAG CTTCACCGTA TCGGAAATTG CCAATAAGAC CTATATCAAC CCAGACAGTT ACCACAGATA TGACCTGTAC GCCGACTTCC TAGCAAGCTT AAATGACCAA GAGCTCGCTA AGACCTACAA AGAGATGACG CCGCTACTCG GTGAAGCCTT TGCAGAGCTA GGCTACAGCG ATATTTCGTT TGATGATCGC ATGCAGCAAG CCATCGAAGT CATGTTAGAT GCGCCGATTA TCGAGCAGCC AATTGAGCTA GACGGTGTCA GCGTTAACTA TCAGTTTGTC GACCCTAAAC TAGAAGCACT GCCTAATGCG CAGAAGCTGA TGATCCGCAT GGGTCCTGAA AACTCACGTA AGGTAAAGTC GGCACTACGC CGCCTACAAA AACATCTTAA CTAA
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Protein sequence | MQLSQEDRIS PQEKSSGTNG LAILAIVAVV ALSAGGYYYL SGNEKIEEPQ IIAPVVIPDP VPEQPLETEA VPEPEIVEAV PVQLPEVEPV PEVEPLPALA DSDTYVQQKV IEVADGMAIE PLLIEDNVVR QFVVFVDNLA QGELARKTAP LKAPSNSFTV SEIANKTYIN PDSYHRYDLY ADFLASLNDQ ELAKTYKEMT PLLGEAFAEL GYSDISFDDR MQQAIEVMLD APIIEQPIEL DGVSVNYQFV DPKLEALPNA QKLMIRMGPE NSRKVKSALR RLQKHLN
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