| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3868 |
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| Symbol | |
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| ID | 5664252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4702004 |
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| End bp | 4703218 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238532 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001503713 |
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| Protein GI | 157963679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.599352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTT ATCCGTTTTG CTCGTCTTCA AGCGTTTTAA TTACAGCACT ACTTTGCCCT
CTAGTGGTAC AAGCCGCGGA AAATGAGTCG CAACAAACCG AGCATATGTG GTCTCAGGGT
TGGTATCTCG GTGGACAGTT TGGTTTAGCG ACAACCAATG TGTCTAACGC GGGATTAGAT
GAGCTATATG AGCAAGCAGG GATCGATGCG AGTAGCACTA AAGTTGATGA TTCTGGAGCG
AGTTATGGTC TATTTCTAGG TTATAAGTTC AATCAATATT TTAGTGTGGA AGCGGGATAC
CTTGATTTGG GCGAGCGTAG CGTCGAATTT TCTGGGCAAA CAACCGATTT AGATGCTTAT
TATGATTTAG CCGAGCATGT ATACCCTGAA ACCGGTGATG GCTGGTCCTT GAGTGTATTG
GGGACCTATC CCCTCAGCGA ACGCTTCAGT GTTACAGGCA AGCTGGGTTA TTTTGCTTGG
GAGTTAGATG CCGTCACCTC TTCGATTGCA GATGAGGCCA GTCAAGTAGG CTCAGACTCC
CACTCTGGCT CTGGAGTTTG GTTGGGCGCC GAGCTAGGTT ATCAAATTAA TCATGATATG
CAGGCCTATG TTAGCTATCA GCATATGCCA CTTGATGCCG ATGAAGTCGG GGTGTTTGCT
TTAGGTCTTA GATACTGGTT TGGCTCTGAT TCTCGTGATG CCGCGCCAGT TTTACCTGCC
GCAGTCGTGC CGACGCTTGC TAAAATTGGT AGTGATGGTG ATAGTGATAG TGATGGCGTG
TTTAACGCGC AAGATCAGTG TCTAGATACG CCGAGCACTC ATGCGGTAGA TAGCCGAGGC
TGCACTCTGT TTGCCCCGAG AGTGGTCGAG ATGAAGCTAA CAGTCTTGTA TGAGAATGAC
AGCGATAAGA TCGACCTAAG CAACACAGAT AAAATCCAAA AGCTAGCCGA CTTTATCGAG
CAATATGATA TTAAACAGAT CACAGTATTT GGTCATACAT CGGCTGTAGG GTCTCAAGCA
TACAATCAAA AATTATCTGA GCGCCGCGCC GCATCTGTGG CTGAAATGCT AGCGGCAGAC
TTTAATATCG CTACAGGTAT CATCAAAGCC GTGGGTAAGG GGGAGTCTGA ACCTATCAGC
CATATCCCAG AACAAAATCG ACGCATTGAG GTTTATCTTA ACGAGGAACT CAATCTACCA
GTGTTAAAGC AATGA
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| Protein sequence | MKTYPFCSSS SVLITALLCP LVVQAAENES QQTEHMWSQG WYLGGQFGLA TTNVSNAGLD
ELYEQAGIDA SSTKVDDSGA SYGLFLGYKF NQYFSVEAGY LDLGERSVEF SGQTTDLDAY
YDLAEHVYPE TGDGWSLSVL GTYPLSERFS VTGKLGYFAW ELDAVTSSIA DEASQVGSDS
HSGSGVWLGA ELGYQINHDM QAYVSYQHMP LDADEVGVFA LGLRYWFGSD SRDAAPVLPA
AVVPTLAKIG SDGDSDSDGV FNAQDQCLDT PSTHAVDSRG CTLFAPRVVE MKLTVLYEND
SDKIDLSNTD KIQKLADFIE QYDIKQITVF GHTSAVGSQA YNQKLSERRA ASVAEMLAAD
FNIATGIIKA VGKGESEPIS HIPEQNRRIE VYLNEELNLP VLKQ
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