Gene Spea_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3864 
Symbol 
ID5664248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4698245 
End bp4698865 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content45% 
IMG OID641238528 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_001503709 
Protein GI157963675 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0799961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA CACTGGCTGA AATCACCCCC ACCTTAGCTG CCAATATGTA CCATGATCCC 
AGCGATAAGA TGCTAGAGGT CTATAAAGAG CATGACTTCA ACGCATGTTA CCCTCTGCTA 
ACAGAGAGCC AGACCCGCAG CGAAGGCGTT GCACTAATTA GCAACTACAT CACTCAATAC 
ACCAGTGAAC AATTTCCAGC TCTATTATTG GATTTTAATC AGTTATTTAT AGGCCCTGGT 
AAAATGAAGG TTCCATTATG GGGCTCATAT TACTTGAGTG AAGATAACCT GCTGTGTGGG 
CCAAGCACAC AGAAACTCCA AGAACGCATC GATGCACTAG GTATAAAACT CAGTACCTCA 
GATGGTGATA ATCAGCCCGT CGACCACATA TCTTTGGTGC TACAACTGGT GGAATTTACC 
CTTAATGAAG GGAAAACATT AGAGCTTAAA GTTATCGTAG GGGAGCATCT AGCGGTTTGG 
GGATATAGAA TCGCCGAGCT CATCATTGAA CATGCGCAGA CTGACTTCTA CTTAGGCTGG 
GGGTTATTGC TGAAAGATTA CCTAGATGTG TTAGTCGAGT CTAACGGCGT CATAGTGCAA 
GAGCGAACGC TATGGGGGTA A
 
Protein sequence
MNRTLAEITP TLAANMYHDP SDKMLEVYKE HDFNACYPLL TESQTRSEGV ALISNYITQY 
TSEQFPALLL DFNQLFIGPG KMKVPLWGSY YLSEDNLLCG PSTQKLQERI DALGIKLSTS 
DGDNQPVDHI SLVLQLVEFT LNEGKTLELK VIVGEHLAVW GYRIAELIIE HAQTDFYLGW 
GLLLKDYLDV LVESNGVIVQ ERTLWG