| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3855 |
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| Symbol | |
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| ID | 5664239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4684997 |
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| End bp | 4686178 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238519 |
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| Product | D-galactarate dehydratase/Altronate hydrolase domain-containing protein |
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| Protein accession | YP_001503700 |
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| Protein GI | 157963666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00201653 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA GCTTTATTGG TTTTGGCCGT ACAGACGGCA GCGTGGGTAT TCGTAATCAT
GTATTGATTA TGGCGGTAGA TGAATGTTGT GATGGCATAG CTCGTGCCAT TGCCGACAGT
ATCGATAACG GTATCGTGGT CACTAACTAC AACACCTGTA TGTATGGTGG TAACGAAGAG
ATGATCAACA CCATGATCCA TACGGGCAAT AACCCGAATG TGGCCGGTGT GCTGGTACTC
GCCATGGGCT GTGGCAGTAT CGATCCTGAA ATCGTAGCTG CACCAATTCG TGAAACTGGC
CGACCTGCGT TTTCATTAGT GTGCATGAAA CAGCAAGGCA CCCGCGCCAC GATTAACCAA
GGTAAAGAAT TAGCGCAGCA ACTACAGCAA GCAGCACAAG ACGCTCCTCG CGTAGAAAAG
CCGATCTCAG AGCTGATCAT CGGTGTTAAG TGCGGCGGTT CTGATACTAG CTCGGGCATT
GCTTCAAACC CGAGTGTTGG CCGAGCAGTC GACACCTTAG TCGATATGGG CGCAACCGCC
ATTGCCGGTG AGCTTATCGA ATTAGTCGGT TGCGAATCCA TTTTACGTCA GCGCGCGGTT
AGCACTGAGG TGGCCGATAA ATTAGAACGC TTAATCCATC AAGAAGAGGC GCGTTGGCAT
GTTGACGGCG CAGAAGTAGA AACCATGAGT ATTGGTAACA GTGTCGGTGG CCTTACTACA
TTAGAAGAGA AGTCTTTTGG TGCACTGAGC AAAACCGGTA CTCGTGCAAT TCAAGATGTA
TTGCAGATTA ATCATCTAGT CCATGAAAAG CCGACCACAG CGGGTTTCTA TCTGTCGGAA
GCCACTCACC TATGTGGCAG CGCAGGTATG CACTTTGCGG CACTGGGCGC GCATCTGATT
TTATGGACTA CCGGCGGCGC AGGCTTTAAT AACCCTATCG TGCCAGTGAT CCGTGTGAGC
GGTAACCAAT ATTTGTTAAA TGAAGATATA GATATTGACG CATCTGGTAT CATGCGCGCC
GAAGAAGGTG TAGAAAGTGT AGCTGAGCGC ATCGTGGCCA AAGTTAGCAA GGTTGCCCAA
GGCCAGCAGA CCAATATTGA AGAGATAGGT TACAGCTATT GTAGCTTGTA TCAAAAAGAC
CAACGCTTAG AAACAGTATT ACGTTTTAAG CCAGGCTGTT AA
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| Protein sequence | MMNSFIGFGR TDGSVGIRNH VLIMAVDECC DGIARAIADS IDNGIVVTNY NTCMYGGNEE
MINTMIHTGN NPNVAGVLVL AMGCGSIDPE IVAAPIRETG RPAFSLVCMK QQGTRATINQ
GKELAQQLQQ AAQDAPRVEK PISELIIGVK CGGSDTSSGI ASNPSVGRAV DTLVDMGATA
IAGELIELVG CESILRQRAV STEVADKLER LIHQEEARWH VDGAEVETMS IGNSVGGLTT
LEEKSFGALS KTGTRAIQDV LQINHLVHEK PTTAGFYLSE ATHLCGSAGM HFAALGAHLI
LWTTGGAGFN NPIVPVIRVS GNQYLLNEDI DIDASGIMRA EEGVESVAER IVAKVSKVAQ
GQQTNIEEIG YSYCSLYQKD QRLETVLRFK PGC
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