| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3849 |
|---|
| Symbol | |
|---|
| ID | 5664233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4675864 |
|---|
| End bp | 4677174 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641238513 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001503694 |
|---|
| Protein GI | 157963660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAACA TAGTGGAAAT TCAAATTGGT GTAGTACTCA GATATAAGAA ACCTTCTTGC
GCTGTAAATA TGTATGAGGA TGGTCATCTT AATTTTCATT TCCTGACAAA GCATTCAGAA
GCTAATAATC TCCAACTTGA GAAAGGAATT AATCCTTCAG CTAAGATAAA AACTAACTCT
GGTGAGCTTG TTCGTTCTGC TATCTTGGTT TCTAGTAGTC CGAATAAGAA AGGTTCTATT
GAGACACCGT GGGAAGATTT CTACGATGTC GATAATGGTC ATATTCGCTA TTTTGGTGAC
AACAAAGAAC CCGGTAAAGA CCCTGCTACA GCCCCGGGAA ACAAGGCGCT TCTCGAAGCC
TTTCGATTAG CTCATTCTCA CTCAGCTGAA GAAAGGGCAT TAACTCCTCC AATATTGTTC
TTTAAACGTG CTGTGATTAA CGGTGTAGCT AAAGGCTATC CACAATTCTA TGGACTTGGG
ATCATCAATA GCGTCGAACT CGTGACTCAA TGGGATAATA AGTTAGCGCG CACATTTACT
AATTATGCTT TCGACTTCAC AGTGCTTTGC ATCGCTAGTG AGCATGAGGA GTTTGAGTGG
GATTGGATTA ATAGCCGGCG TAAGAAAGGA TTTTCGCTAT CTATTACCAA TAAAGCATCC
CCTAAAAGTT GGCGTCAATG GCTTATTGAG GGAAGTAATT CACTTAATAA GCTGCGCCGC
CGTGTTTCTA AACTCAGTCT TGAAAAGACA GTTAACCAGA AACCTATTCC GGGTTCTGAA
TCCGATCGTA TTCTGAATGA AATCTATATC TATTACGCCA ACAAAAAACA CCGGTTCGAG
GCGCTTGCTG AAGTAATCGC CGCGCGGGTG ATAGATCGTG AGTTCGGTAT ATATCATAAA
GGCTGGGTGA CTCAAGGCTC TAGTGATGGC GGCGCAGACT TTGTCGGTAA GGTGACTTTA
GGCAGTGGCT TTTCAAAAGT TGAATTGATT GTTTTAGGGC AAGCTAAGTG TGAGGCATTA
AATAGTCCAA CGGGAGGCAA TCATATTGCC CGAACAGTTG CCCGCCTAAA GCGTGGCTGG
CTAGGTGTAT ATGTTACTAC TAGTTATTTC TCTGACTCTG TTCAGCGTGA AGTGATTGAA
GATAAGTATC CAATCATTTT GATCCATGGG CGAAGAATTG CTGAAGAGGT GGCTAAAATT
GTCTATGAAA GTGAAGAGTT TGAGAGTGTG AATAGCTTTT TAGTCGCGAT GGATAAAGAC
TATCCAACGC GCCTGAAACA AAGACAAGCT GAAGAAGTTT TGAATATTTA G
|
|---|
| Protein sequence | MINIVEIQIG VVLRYKKPSC AVNMYEDGHL NFHFLTKHSE ANNLQLEKGI NPSAKIKTNS
GELVRSAILV SSSPNKKGSI ETPWEDFYDV DNGHIRYFGD NKEPGKDPAT APGNKALLEA
FRLAHSHSAE ERALTPPILF FKRAVINGVA KGYPQFYGLG IINSVELVTQ WDNKLARTFT
NYAFDFTVLC IASEHEEFEW DWINSRRKKG FSLSITNKAS PKSWRQWLIE GSNSLNKLRR
RVSKLSLEKT VNQKPIPGSE SDRILNEIYI YYANKKHRFE ALAEVIAARV IDREFGIYHK
GWVTQGSSDG GADFVGKVTL GSGFSKVELI VLGQAKCEAL NSPTGGNHIA RTVARLKRGW
LGVYVTTSYF SDSVQREVIE DKYPIILIHG RRIAEEVAKI VYESEEFESV NSFLVAMDKD
YPTRLKQRQA EEVLNI
|
|---|
| |