| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3844 |
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| Symbol | rph |
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| ID | 5664228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4671555 |
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| End bp | 4672268 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238508 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001503689 |
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| Protein GI | 157963655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAA GCAACAGAAC TCCAGCACAG TCTCGCCCTG TGACTATCAC TCGTCAGTTT
ACTGCTCACG CCGAAGGTTC GGTATTAGTT GAGTTCGGTG ACACTAAAGT ACTGTGTACC
GCTAGTTTTG AAGAAGGCGT ACCGCGTTTC CTTAAGGGCC AAGGCCAAGG TTGGGTAACT
GCTGAATATG GCATGTTGCC ACGTTCTACT CATAGCCGTA TGCAGCGTGA AGCCGCTCGC
GGTAAGCAGT CTGGTCGTAC TCAAGAAATT CAACGTCTAA TTGGTCGCTC ACTACGCGCT
GCGGTAGACA TGAAGCTTCT AGGTGAAAAC ACTATCGTTA TCGATTGTGA CGTGATTCAG
GCCGATGGTG GTACTCGTAC CGCTGCTATC ACTGGTGCAT GTGTTGCATT AGTTGACGCG
CTTAACTGGG CTCGTGGTAA AGGCATCTTG AAGACTAACC CACTTAAGTT CCTTATTGCT
GCGGTAAGTG TTGGTATTTA TAAAGGCGAG CCAATCTGCG ATCTAGAATA TATCGAAGAT
AGCGCTGCTG AAACTGACAT GAACGTGGTA ATGACTGAAA CCGGTAAGAT CATCGAGATC
CAGGGTACTG CAGAAGGTGA GCCATTTAGC CACGAAGAGC TATTGAGCCT ACTTGATTTG
GCTAAGCACG GTATTCGCGA AATCGTAGAT ATCCAGAAAG CGTCATTGAG CTAA
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| Protein sequence | MRPSNRTPAQ SRPVTITRQF TAHAEGSVLV EFGDTKVLCT ASFEEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMQREAAR GKQSGRTQEI QRLIGRSLRA AVDMKLLGEN TIVIDCDVIQ
ADGGTRTAAI TGACVALVDA LNWARGKGIL KTNPLKFLIA AVSVGIYKGE PICDLEYIED
SAAETDMNVV MTETGKIIEI QGTAEGEPFS HEELLSLLDL AKHGIREIVD IQKASLS
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