Gene Spea_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3840 
SymbolslmA 
ID5664224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4666647 
End bp4667240 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID641238504 
Productnucleoid occlusion protein 
Protein accessionYP_001503685 
Protein GI157963651 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00664895 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAA GCCCGAAAAT AAACCGTCGT GAGCATATCC TCCAATGTTT AGCGACTATG 
TTAGAAACAA GCCCTGGACA AAGGATCACT ACAGCTAAAT TAGCGGCTGA AGTCGGCGTT 
TCAGAAGCGG CGCTTTACCG CCACTTTCCA AGTAAGGCGC GCATGTTTGA AGGCCTCATC 
GAATTTATCG AAGAGTCATT GCTCTCTCGC ATCAACCTGA TCATGGACGA AGAGAAAGAC 
ACCATGAAGC GTTGTCAGCA ATTGCTGCAG CTACTACTGG TATTTGCCGA GCGAAACCCG 
GGGATCTCAC GAGTATTAAA TGGTGATGCA CTGCTAGGCG AAAATGAACG TCTACGTAGC 
CGTATCAGTC AGCTATTCTC AAAAATTGAA ACCCACTTAA AGCAAATCCT GCGTGAAAAA 
AGCTTACGTG AAGGCAAAGG CTTTGAGCTC GATGAAGCAG TGTTAGCTAA CTTACTGCTT 
GCCGTTGCCG AAGGCCGAAT CGCTCAGTTT GTTCGTAGTG AGTTTAAACT CAAGCCGACC 
AAGCACTTCA ATGAGCAGTG GAACTTCATC CAACAGCAAC TGCTTCAAAG CTAA
 
Protein sequence
MAASPKINRR EHILQCLATM LETSPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI 
EFIEESLLSR INLIMDEEKD TMKRCQQLLQ LLLVFAERNP GISRVLNGDA LLGENERLRS 
RISQLFSKIE THLKQILREK SLREGKGFEL DEAVLANLLL AVAEGRIAQF VRSEFKLKPT 
KHFNEQWNFI QQQLLQS