Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3837 |
Symbol | radC |
ID | 5664221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4664069 |
End bp | 4664746 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641238501 |
Product | DNA repair protein RadC |
Protein accession | YP_001503682 |
Protein GI | 157963648 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00013144 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATAA AGGATTGGCC AGAAGGCGAG GCGCCGCGAG AAAAATTGTT GAGCCAAGGG GTAAAACAAT TATCGGATGC CGAATTATTA GCTGTTCTGC TTAGAGTGGG TTTAAAAGGA TTAAGTGCTG TAGAGCTGGC TCGAATCATG ATAAATGAGT TTGGTGGACT TAGAAGCTTG CTTAATGCGT CTCAGGCACA AGTTTGTCGA TTAGATGGAA TTGGGCCGGT AAAATTTGCT CAAATGCAGG CCGCAGTGGA ATTAGGTGCA CGAATTTCGC AAGAAAACCT AAAAAGAGGT AAAATTTTAT CGGATCCTGA TTTAACTCGG GACTATTTAA TGAGACAATT GTCTGATCGT GCCTATGAGG TGTTCGCTAT TTTATTGTTA GATAGTCAAC ATAGGGTAAT TCAATTCGTT GAATTATTTA GAGGCACAAT AAATTCAGCG TCAGTTTATC CACGAGAAGT GGTAAGTTTG GTGCTTGAAA AAAAGGCTGC GGCTGTGATC GTGTGTCACA ATCATCCTTC TGGAATTGCA GAACCAAGTA CAGCCGATAG ACGAATTACT GAGCGGTTGA AGCAAGCCCT ACAAACTATT GATGTTTCCT TACTGGATCA CATGGTTGTG GGCGATCGAG AGATAGTTTC TTTCGCTGAA AGGGGATGGA TTGATTAA
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Protein sequence | MAIKDWPEGE APREKLLSQG VKQLSDAELL AVLLRVGLKG LSAVELARIM INEFGGLRSL LNASQAQVCR LDGIGPVKFA QMQAAVELGA RISQENLKRG KILSDPDLTR DYLMRQLSDR AYEVFAILLL DSQHRVIQFV ELFRGTINSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA EPSTADRRIT ERLKQALQTI DVSLLDHMVV GDREIVSFAE RGWID
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