Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3832 |
Symbol | |
ID | 5664216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4660109 |
End bp | 4660996 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238496 |
Product | transporter DMT superfamily protein |
Protein accession | YP_001503677 |
Protein GI | 157963643 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA TTGAATACCG TAAAGGCATT ATTTATGCAG TTTGCGCCTA TACCCTTTGG GGCTTTGCTC CCATATATTT TAAATTGCTT GATAGCGTCT CTGCTGCCGA GATCTTACTG CATCGCGTGA TCTGGTCATT TTTCTTTGTC ACGATTTTAA TCGCACTGTT TGGTGGTTTT GCTCGCTTGC GTCACCTACT CAAACAGCCA AAGCAACTTG CCGTGCTGTG TGTGACTTCC ATACTTATTG CCGGTAACTG GCTACTATTT ATCTGGGCGG TCAACAACGA CCACATGCTA GATGCCAGCT TAGGCTATTT CATTAATCCA CTGGTGAATG TGAGTCTCGC CATGATATTC CTCGGTGAGC GCCTGCGTAA ACTGCAATGG GCCGCCGTGG CACTAGCGGC AACAGGGGTA ATGATCCAGC TTATCTCCTT TGGATCCATT CCGTTAGTAT CGCTGGGCCT TGCCTGTTCA TTCGCCTTCT ATGGCTTGCT ACGTAAAAAA GTGAATGTCG ACGCCAAGAC GGGATTATTG GTAGAAACCG CTATTTTGCT GCCTATCGCG CTCATATATC TGTTTACGAA TATGGGAGAT TCATTAAGCC ATCTGTTCAC TAACGATTTG CGTTTGAATT TACTCTTAGT TGCAGCGGGG ATCGTAACCA CAGTTCCGTT ACTGTGCTTT GCCTCTGCAG CCGTTAGGAT CCCGTTTTCA ATGCTAGGCT TCTTCCAATA CATAGGCCCA AGCATCATGT TTATCCTAGC TATTGCCTTG TTTAACGAGC CCTTCGACGC AGAGAAAGGC ATTACCTTTG CGTTCATTTG GGCAGCCTTG TTCCTCTTTA CGCTGGACAT GCTATACAAG CGAAAAGCTA AGAAGTAG
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Protein sequence | MQEIEYRKGI IYAVCAYTLW GFAPIYFKLL DSVSAAEILL HRVIWSFFFV TILIALFGGF ARLRHLLKQP KQLAVLCVTS ILIAGNWLLF IWAVNNDHML DASLGYFINP LVNVSLAMIF LGERLRKLQW AAVALAATGV MIQLISFGSI PLVSLGLACS FAFYGLLRKK VNVDAKTGLL VETAILLPIA LIYLFTNMGD SLSHLFTNDL RLNLLLVAAG IVTTVPLLCF ASAAVRIPFS MLGFFQYIGP SIMFILAIAL FNEPFDAEKG ITFAFIWAAL FLFTLDMLYK RKAKK
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