Gene Spea_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3832 
Symbol 
ID5664216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4660109 
End bp4660996 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content46% 
IMG OID641238496 
Producttransporter DMT superfamily protein 
Protein accessionYP_001503677 
Protein GI157963643 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA TTGAATACCG TAAAGGCATT ATTTATGCAG TTTGCGCCTA TACCCTTTGG 
GGCTTTGCTC CCATATATTT TAAATTGCTT GATAGCGTCT CTGCTGCCGA GATCTTACTG
CATCGCGTGA TCTGGTCATT TTTCTTTGTC ACGATTTTAA TCGCACTGTT TGGTGGTTTT
GCTCGCTTGC GTCACCTACT CAAACAGCCA AAGCAACTTG CCGTGCTGTG TGTGACTTCC
ATACTTATTG CCGGTAACTG GCTACTATTT ATCTGGGCGG TCAACAACGA CCACATGCTA
GATGCCAGCT TAGGCTATTT CATTAATCCA CTGGTGAATG TGAGTCTCGC CATGATATTC
CTCGGTGAGC GCCTGCGTAA ACTGCAATGG GCCGCCGTGG CACTAGCGGC AACAGGGGTA
ATGATCCAGC TTATCTCCTT TGGATCCATT CCGTTAGTAT CGCTGGGCCT TGCCTGTTCA
TTCGCCTTCT ATGGCTTGCT ACGTAAAAAA GTGAATGTCG ACGCCAAGAC GGGATTATTG
GTAGAAACCG CTATTTTGCT GCCTATCGCG CTCATATATC TGTTTACGAA TATGGGAGAT
TCATTAAGCC ATCTGTTCAC TAACGATTTG CGTTTGAATT TACTCTTAGT TGCAGCGGGG
ATCGTAACCA CAGTTCCGTT ACTGTGCTTT GCCTCTGCAG CCGTTAGGAT CCCGTTTTCA
ATGCTAGGCT TCTTCCAATA CATAGGCCCA AGCATCATGT TTATCCTAGC TATTGCCTTG
TTTAACGAGC CCTTCGACGC AGAGAAAGGC ATTACCTTTG CGTTCATTTG GGCAGCCTTG
TTCCTCTTTA CGCTGGACAT GCTATACAAG CGAAAAGCTA AGAAGTAG
 
Protein sequence
MQEIEYRKGI IYAVCAYTLW GFAPIYFKLL DSVSAAEILL HRVIWSFFFV TILIALFGGF 
ARLRHLLKQP KQLAVLCVTS ILIAGNWLLF IWAVNNDHML DASLGYFINP LVNVSLAMIF
LGERLRKLQW AAVALAATGV MIQLISFGSI PLVSLGLACS FAFYGLLRKK VNVDAKTGLL
VETAILLPIA LIYLFTNMGD SLSHLFTNDL RLNLLLVAAG IVTTVPLLCF ASAAVRIPFS
MLGFFQYIGP SIMFILAIAL FNEPFDAEKG ITFAFIWAAL FLFTLDMLYK RKAKK