| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3824 |
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| Symbol | |
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| ID | 5664208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4648523 |
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| End bp | 4649809 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238488 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001503669 |
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| Protein GI | 157963635 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC GTTTAATAAC TCTTGCTGTT AGTACGGCAC TTTTGGGGAC AGTTACACAG
GTTCAAGCTG CTGGTTTTCA ATTAGCTGAA TACTCTGCAA CTGGTTTAGG TCGTGCGTAT
GCTGGTGAAG CAGCCATGGC CGATAACGCT GCGGCGCAAT TTCGTAATCC AGCTATGCTG
ACTTATCTCG AAGGCACGCA AATGACAACT GGCGCAATTT TGGTTATGCC GAATATTGAT
GTTGACGGCA CGGTGAGTTT TGCGGGTCAA TCAACTCCGT CATCAGCAAA AGATATTGCT
GGCGACGCGG TAGTACCTAA CTTTTATGTG TCACACCAGT TAAACGACCA ATGGTTCCTA
GGTTTAGCGC TTGGTAGCAA CTTTGGTATG GCAACTGAAT TAGATGATAG CTTCCTTGGT
ACTCAGTTTG GTAATGAAGC ATCAATTACC GCTATTGAAG TAAACCCAAA TGTGGCTTAC
CGCATTAATG ACCAGTTTAG CGTCGGTGCG GGTGTTCGTT TGGTGTTAGG GGAAGGTAGC
TTTGGTGCAC AAGCGCCAAC ATCAGTTGGT CCTCTGCAAG GTACCACCCT TAAGTACATG
GAAGGTGATG ATATCTCTTG GGGTTGGCAG TTAGGCGGTG CGTGGCAGAT CAATGCTAAT
AACCGTATCG GCTTTAACTA TCGCTCAGAA GTCGACCAAA ATCTTGAAGG CGAAGCGAGA
GGCCTAGGTT TTGATTTCGC AATGATCGCT CAAGGTAAAG CGCCTTCTAG CCATTACGAT
GGTGCAATGG AATTAGCGCT ACCAGCAACA GCAGAAATTG CTAGCTTCCA TCAATTGACC
GACAAACTTG CTATTCATGC GAGTGTTAAC TGGACGGATT GGAGCTCATT TGAAAAGCTT
GAAGCAATGA TCCCTGAGAT CTCAGCAGAC CCAATCTTAG TGAAGCAAGA AAATTGGGAA
GACAACTACC GCTTTGCAGT AGGTGCGACT TACCAGTTAT CACAAAAATC AACGCTAAGA
ACCGGTATTG CTTATGACCA AGCTGCAGTG TCTGATGCTA ACCGTACAAC CACTATTCCT
GAAGTTGATC GTTTATGGTT GAGCGTGGGT TATGGTTACC AGTACAGTGA CAACCTAGAT
TTTGATTTTG GCGCAACTTA CATCTTTGCT GATGAGTCTC CAATCCATGA GCATGACGAA
GATTCTGCTA TGTTTGGTGG TACTTTCGAA GGTCAAGTTA GCGGCAACAT CATTCTAGTT
GGTGTTCAGG CGACTTACCG CTTCTAA
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| Protein sequence | MNKRLITLAV STALLGTVTQ VQAAGFQLAE YSATGLGRAY AGEAAMADNA AAQFRNPAML
TYLEGTQMTT GAILVMPNID VDGTVSFAGQ STPSSAKDIA GDAVVPNFYV SHQLNDQWFL
GLALGSNFGM ATELDDSFLG TQFGNEASIT AIEVNPNVAY RINDQFSVGA GVRLVLGEGS
FGAQAPTSVG PLQGTTLKYM EGDDISWGWQ LGGAWQINAN NRIGFNYRSE VDQNLEGEAR
GLGFDFAMIA QGKAPSSHYD GAMELALPAT AEIASFHQLT DKLAIHASVN WTDWSSFEKL
EAMIPEISAD PILVKQENWE DNYRFAVGAT YQLSQKSTLR TGIAYDQAAV SDANRTTTIP
EVDRLWLSVG YGYQYSDNLD FDFGATYIFA DESPIHEHDE DSAMFGGTFE GQVSGNIILV
GVQATYRF
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