Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3813 |
Symbol | murD |
ID | 5664197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4636211 |
End bp | 4637530 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238477 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001503658 |
Protein GI | 157963624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGC AATATTCACA CATAGTTTTA GGTTTAGGTG CGACAGGTTT GTCTGTTGTA CGTTACCTGT GTGCGCAAGG GATAGTTCCT TTAGTCATGG ACAGCCGAGC TCAGCCTCCG GGAGCTGATA GCTTGGCGAC AGAGTTTCCT CAAGTTGAGC TAGTCACTGG TGGTTTTGAT TGTCGCTATC TAGTACAGGC ACAGCAGATT GTCATTAGTC CTGGTATCGC CTGCGAAACG CCAGAAGTGC GAGTCGCATT TGATATGGGG ATTGAAGTGA TTGGCGATGT TGAGCTATTT GCACGGGCAG TCGCGCAAAC CTCAGCCAAG GTCATAGGTA TTACTGGCTC AAATGGTAAG ACAACTGTCA CGACCTTAGT CGGTGAGATG GCTAAGGCTA GCGGCAGCTC TTACGCCGTG GGTGGCAACA TTGGTGTGCC AGCTCTTGAC CTATTGCTCG AACCTAAAGA TCTGTATGTC CTCGAGTTGT CGAGTTTTCA GTTAGAGACA ACCTATAGCT TGCAGTGTGT TGCGGCGACT TGTCTTAACA TTAGCGAAGA TCATATGGAT CGCTATAGCG ATCTTGAGTC TTATCGTCAG GCGAAGCTTA AGTTATACGA GCAGAGCAAG ATGGCGGTGT TTAATCGTGA AGACACGTTA ACGCTACCGA ACAACCCGAC TAACCAACAA AGCTTTGGTT TAGATGCGCC AGAGGGCGAT GATTGGGGCG TTTCGGGCGG CATGATAGTG CAAGGTAGTA GCCAGATCAT GCCGATTAGC GATGTCGCAC TCGTAGGGAG CCACAACCTT GCCAATATTA TTGCAGCGAT GGCATTGACC ACTGCGGCGG GGATTAAACG TGAGTGTCAG ATTGAGGTGG CTAAGACGTT TTTAGGCCTT GCTCATCGCT GTGAAGTGGT TGCAGATATT GATGGCGTCA CTTATGTCAA CGACTCGAAG GCCACGAATA TCGGCGCTAC AGTCGCTGCT ATTGATGGTT TGAGTGAGCA CTTAGGTGAA TTGATCTTGA TCGCAGGTGG CGATGGCAAA GGGGCTGACT TTAAACCGTT AGAGCCCGTG CTTGAGAAGG TGAGTCAGCT AATCGTTTTA GGTAAAGATG GCGACAAAAT CGCAGGGTTG AAACCGGAGG CGATAAAAGT CGCCAATATG GTTGAAGCGG TAGCAAAAGC GCATGAGCTA GCTACAGCAG GTGATATTGT TATTCTGTCA CCGGCTTGTT CAAGCTTAGA TATGTACCCC AACTTTATGG CTCGTGGAGA TGAATTCCGT AGCCTGGTTG AAGCGCTTCA TGGCGAGTAG
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Protein sequence | MAQQYSHIVL GLGATGLSVV RYLCAQGIVP LVMDSRAQPP GADSLATEFP QVELVTGGFD CRYLVQAQQI VISPGIACET PEVRVAFDMG IEVIGDVELF ARAVAQTSAK VIGITGSNGK TTVTTLVGEM AKASGSSYAV GGNIGVPALD LLLEPKDLYV LELSSFQLET TYSLQCVAAT CLNISEDHMD RYSDLESYRQ AKLKLYEQSK MAVFNREDTL TLPNNPTNQQ SFGLDAPEGD DWGVSGGMIV QGSSQIMPIS DVALVGSHNL ANIIAAMALT TAAGIKRECQ IEVAKTFLGL AHRCEVVADI DGVTYVNDSK ATNIGATVAA IDGLSEHLGE LILIAGGDGK GADFKPLEPV LEKVSQLIVL GKDGDKIAGL KPEAIKVANM VEAVAKAHEL ATAGDIVILS PACSSLDMYP NFMARGDEFR SLVEALHGE
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