Gene Spea_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3806 
SymbollpxC 
ID5664190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4627998 
End bp4628918 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content44% 
IMG OID641238470 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001503651 
Protein GI157963617 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000181176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTC AAAGAACTGT CAAAGAAATG GTTAAGACTA CTGGTGTTGG ATTGCATTCC 
GGCAACAAGG TGACTTTGAT CATTAAGCCC GCACCAGTTA ATACCGGCAT TAAGCTAGTT 
CGTACCGACT TGTCACCAGC AGTGGAAATT CCAGCTGTTG CCGATCAAGT GCGTGAAACG 
ACTATGTGTA CAGCCTTGGT TAATGACGAT GGTGTTCGTA TATCAACAAT TGAGCATCTA 
TTCGCTGCGC TAGCCGGATT AGGTATCGAT AACGCAGTTA TCGAAGTTGA CGCGCCTGAA 
ATTCCAATTA TGGATGGCAG TGCGAGTCCT TTTGTTTTCC TATTGCAATC AGTAGGCATC 
CAAGAGCAAA ACGCAGCTAA GAAATATATT AAAATCACTA AACCAATTCG TGTTGAAGAT 
GGTGATAAAT GGGCAGAGTT GAAACCCTTT AAAGGTTTCA GAGTCGATTT CGCTATTGAC 
TTTAATCACC CTGAAATTGC TCGTAGTCAG CAGCATATGG TGATGGATTT CTCATCGTCT 
GCTTTTATTA AAGATATCAG CCGCGCTAGA ACCTTTGGTT TTATGCGAGA TATCGAATAT 
TTAAGAGCCA ATAATCTTGC ACTAGGCGGC AGCATGGAAA ATGCTGTTGT ACTTGACGAA 
TATCGCGTCC TCAACCCCGA TGGCCTGCGT TATGAGGACG AGTTTGTTAA GCACAAGATT 
CTTGATGCCT TTGGTGATCT GTATGTGGCG GGTCACGCGA TTGTTGGTGA GTTCTGTGCA 
TATAAAACAG GACATGCACT TAACAACCAG TTAGTGCGTG CCATGCTTGC ACAACAAGAT 
GCTTGGGAAA TCGTGAGCTT TGAAAAAGAA GCCGACGCAC CTGTCAGCTT CTCAGTACCA 
GCCGGTGCTG TATTCGCTTA A
 
Protein sequence
MIFQRTVKEM VKTTGVGLHS GNKVTLIIKP APVNTGIKLV RTDLSPAVEI PAVADQVRET 
TMCTALVNDD GVRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSVGI 
QEQNAAKKYI KITKPIRVED GDKWAELKPF KGFRVDFAID FNHPEIARSQ QHMVMDFSSS 
AFIKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI 
LDAFGDLYVA GHAIVGEFCA YKTGHALNNQ LVRAMLAQQD AWEIVSFEKE ADAPVSFSVP 
AGAVFA