| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3797 |
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| Symbol | |
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| ID | 5664182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4610933 |
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| End bp | 4611694 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238457 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001503643 |
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| Protein GI | 157963609 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACAAC AGCAGCCATT AATCAGCCAT CTGCTCGAGT TGCGCACTAA GTTACTGCGG
GCAATTGGCA GTGTTCTTTT GGTGTTTATT TGCTTGGTAT ATTGGGCAAA CGATATCTAC
CATTATATGG CCACCCCATT GATGCAGGCA CTGCCTGAAT CAAGCAGTAT GATTGCAACC
GATGTTGCTG CGCCATTTTT TGCCCCCTTT AAATTGACAT TAGTTCTGTC GTTTTTTGTT
GCAGTACCTT ATGTCCTTTA TCAAGTGTGG TCTTTTGTCG CACCTGGTCT GTATAAGCAT
GAAAAGCGCT TGGTTGTACC TCTACTAGCG AGCAGTACGT TGCTCTTCTA TCTAGGTATC
GCTTTCGCCT ATTATATCGT TTTCCCTGTC GTATTTGGTT TCTTTACCAG CGTGGCCCCT
GAAGGGGTTG AAGTTGCGAC TGACATCAGC AGTTATTTGA ATTTTATTCT AAAACTGTTC
TTTGCATTTG GTTTGGCTTT TGAGATCCCA GTAGCGGTTG TCCTACTATG TTGGGCGGGT
GTCACCACAC CTGCAGAGCT AAAAGAGAAA CGACCATATA TCGTGGTCGG TGCATTTGTT
ATCGGTATGC TACTAACGCC ACCAGATATC ATCTCTCAAA CTATGTTAGC GATCCCAATG
CTAATTCTGT TTGAAGGCGG TTTAGTGGCT GCACGTTTCT ACAGCAAGCC AGATGAAGAT
GAAGATGAAG ATGAGACTGA GCAGGAAAAA CCTGAGTCTT AG
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| Protein sequence | MSQQQPLISH LLELRTKLLR AIGSVLLVFI CLVYWANDIY HYMATPLMQA LPESSSMIAT
DVAAPFFAPF KLTLVLSFFV AVPYVLYQVW SFVAPGLYKH EKRLVVPLLA SSTLLFYLGI
AFAYYIVFPV VFGFFTSVAP EGVEVATDIS SYLNFILKLF FAFGLAFEIP VAVVLLCWAG
VTTPAELKEK RPYIVVGAFV IGMLLTPPDI ISQTMLAIPM LILFEGGLVA ARFYSKPDED
EDEDETEQEK PES
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