Gene Spea_3796 details

Gene Information

• Locus tag: Spea_3796
• ID: 5664181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4610534
• End bp: 4610929
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641238456
• Product: twin-arginine translocation protein, TatB subunit
• Protein accession: YP_001503642
• Protein GI: 157963608
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.67635
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGACG GTATCGGCTT TATGGAGTTG CTGCTGATTG GGATCTTGGG CCTAGTAGTA 
CTTGGCCCAG AAAGACTTCC AACGGCTGTG CGCTCAATTT CTAGCTGGAT CCGCGCCATG 
AAAAAAATGG CTAACTCGGT AAAAGACGAA TTAGAGCAAG AGCTTAAAAT TGAGCAACTG 
CACTCTGATT TGAAAAATGC AGAGAGTCAG GGTTTAAAGA ACCTTTCTCC AGAGTTACAG 
GATTCAATCG ATCAATTAAA AGAAGCGGCT CAATCTGTTA ATCGTCCTTA TCAAGTAGAA 
GACGTGCCTG CGGCGAAAGA AACTCCTGCC AAAGAAACAC CAACTGCTGA AAAAAGTACG 
ACTACAGGTG CTAATTCAGA CAAACCTAAC GGGTAG 

 

Protein sequence

MFDGIGFMEL LLIGILGLVV LGPERLPTAV RSISSWIRAM KKMANSVKDE LEQELKIEQL 
HSDLKNAESQ GLKNLSPELQ DSIDQLKEAA QSVNRPYQVE DVPAAKETPA KETPTAEKST 
TTGANSDKPN G