| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3788 |
|---|
| Symbol | |
|---|
| ID | 5664173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4603988 |
|---|
| End bp | 4604497 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641238448 |
|---|
| Product | phosphoesterase PA-phosphatase related |
|---|
| Protein accession | YP_001503634 |
|---|
| Protein GI | 157963600 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAA TAACGTCGTT TGACAGAAAG CTCTACTACT ATGTAGTGCA AAAAGGCCAA
GAGCACGGAC TGCAGAAGCT GGCATTAAAG TTATCTGCAT CGGGCAATGG CCCTGTGTAC
TTATATTTAG CGGTGGCGTG TCTCATCATA GATAGTCGAG GCGAAGCGTT ATTAAACGCT
CTGGTTGCTG CATACCTTGT TGAGCTCCCA TTGTATTTTG CGCTTAAGAA TATGATCCGC
CGTCCGCGGC CATGTCATGC CCTGAGTGAT GGAATTGCCA GTTTCGAGCC TGCCGACAAG
TTTAGCCTTC CGTCCGGTCA TACTGCGGCG GCTTTTGTTA TGGCAACCAG TATCTACCTA
GTTTACCCGC AATTGTTTTA TATCGCGGTA GCTTGGGCAG TAGCGATTGG CTTAGCTCGT
ATAGTGCTCG GCGTTCACTA CCCAATGGAT ATAGTTGCCG GCGCAATTCT TGGGATTGTT
TCTGTATTAT TGAGCCAACA ATTCATCTAG
|
|---|
| Protein sequence | MTSITSFDRK LYYYVVQKGQ EHGLQKLALK LSASGNGPVY LYLAVACLII DSRGEALLNA
LVAAYLVELP LYFALKNMIR RPRPCHALSD GIASFEPADK FSLPSGHTAA AFVMATSIYL
VYPQLFYIAV AWAVAIGLAR IVLGVHYPMD IVAGAILGIV SVLLSQQFI
|
|---|
| |