| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3765 |
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| Symbol | |
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| ID | 5664150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4578008 |
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| End bp | 4579741 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238425 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001503611 |
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| Protein GI | 157963577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.238087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCCA AGTTAAAGAT GCGACTCGGT GATCTGCTTG TTCAAGAGCA GATCATCTCT
GAAGAGCAGT TACAGCAAGC GTTAGGCGAA CAGCGTAATA CGGGAAAGAA GCTTGGTCGT
ACATTAATCG ACTTGTCATG TATTACTGAG CAGCAATTAC TACAATTTTT GTCGCATCAG
CTTAACATTC CTTTTATCGA TATTAGTAAG CGTGCCATCG CTACTGAAGT CGTGAGTCTG
CTACCTGAGG TGCAGGCTCG CCGTTATCGC GCTCTGGTTG TCGAAGATAA TGGTGAAGGC
GTGCTGGTAG CCATGAGCGA TCCCGCCGAT CTACAGGCGA TGGATAATCT AGAGTTGCAG
TTGGCACCTA AGAGTATCTC TATTGCTGTA GTGACAGAGC AGCAGCTATT AGATGCGTTT
GATAATCTCT ATCGACGCAC CGATGAGATT GCTCAAATTG CAGGTAAGCT CGAAGAGGAA
TACGCCGCCG ATGATCTGTT CGATCTCGGT AGCTTGACCG ATGGCGACAG TGATAACGAA
ACCACAGTCG TTAAACTGCT ACAGTCTATC TTCGAAGATG CTGTGCAGAT GCGCGCTTCG
GATATCCATA TTGAACCGGG TGAGAAAGCG CTGCGAATTC GTCAACGTAT CGACGGTCAG
TTACATGAAA ACATCCTACC GGAAGTTAGC ATCGCAGCGG CGTTAGTATT GCGCTTAAAG
TTGATGGCGG GCTTAGATAT TTCAGAGAAA CGATTGCCAC AAGATGGCCG TTTCCACATA
GAGATTAAAG GGCATAAGAT TGACGTTCGT ATGTCGACCA TGCCGATTTA CCATGGTGAA
TCTGTGGTGA TGCGTTTGCT GGACCAATCT GCTGGTCTAC TGACCTTGAA TGAAACTGGG
ATGCCGCCAG AAATGTTGGC GAGGATCCGT CGGCAGATCA AGCGTCCTCA CGGCATGCTG
TTAGTCACGG GCCCAACGGG TAGCGGTAAA ACCACTACGC TTTATGGCGT CTTGAGTGAG
CTCAATACCG CAGATCGCAA GATCATCACA GTTGAAGATC CAGTTGAATA CCAGTTACCG
CGTATTAATC AGGTGCAGGT AAACCATAAG ATTGGTCTCG ATTTTTCCAA TGTACTGCGA
ACCACGTTAC GACAAGATCC CGACATCATC ATGGTCGGTG AGATGCGTGA CCAAGAGACG
GTAGAAATTG GTCTTCGTGG CGCATTAACC GGTCACTTTG TATTATCGAC CTTGCATACC
AACGATGCGG TGACCAGTGC CCTGCGTTTG CTAGACATGG GCGCGGCGAG TTATCTGGTT
GCGAGCGCAC TTAGAGTCAT TATTGCTCAG CGCTTAGTGC GCCGAGTGTG CCAGAACTGC
GCCATCGATT ATCAGCTTTC TGCCCCGGAT AAAGCCTGGC TATCTAGCGT GAGCAAGCTC
GATTACTCGC AAGCGACATT TAGGATAGGT ACTGGCTGTC AGAGCTGTAA CGGCAGCGGT
TATCGTGGTC GAATAGGTGT ATTTGAAATT TTAGAGCTCG ACGAACCAAT GATTGAGGCT
ATGCGTACGG GCAACCCGCA GGACTTTACT CGCGCCGCTT ATCAGAGCCC TAACTTTACG
CCGCTTGCAG AATCGGCATT AAAGTACCTA GCTCAAGGGA TGACAACAAT CGAAGAGGTC
GCAAAACTCG TTGAAGATGT TAGTGACACT CAATTAGAAT TTGGTGAGGC TTAA
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| Protein sequence | MKPKLKMRLG DLLVQEQIIS EEQLQQALGE QRNTGKKLGR TLIDLSCITE QQLLQFLSHQ
LNIPFIDISK RAIATEVVSL LPEVQARRYR ALVVEDNGEG VLVAMSDPAD LQAMDNLELQ
LAPKSISIAV VTEQQLLDAF DNLYRRTDEI AQIAGKLEEE YAADDLFDLG SLTDGDSDNE
TTVVKLLQSI FEDAVQMRAS DIHIEPGEKA LRIRQRIDGQ LHENILPEVS IAAALVLRLK
LMAGLDISEK RLPQDGRFHI EIKGHKIDVR MSTMPIYHGE SVVMRLLDQS AGLLTLNETG
MPPEMLARIR RQIKRPHGML LVTGPTGSGK TTTLYGVLSE LNTADRKIIT VEDPVEYQLP
RINQVQVNHK IGLDFSNVLR TTLRQDPDII MVGEMRDQET VEIGLRGALT GHFVLSTLHT
NDAVTSALRL LDMGAASYLV ASALRVIIAQ RLVRRVCQNC AIDYQLSAPD KAWLSSVSKL
DYSQATFRIG TGCQSCNGSG YRGRIGVFEI LELDEPMIEA MRTGNPQDFT RAAYQSPNFT
PLAESALKYL AQGMTTIEEV AKLVEDVSDT QLEFGEA
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