| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3764 |
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| Symbol | |
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| ID | 5664149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4576785 |
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| End bp | 4578005 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238424 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001503610 |
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| Protein GI | 157963576 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000373455 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAT ATCAGTACCG CGGTCGAAGC GCTCAAGGTG AGCAGGTTAA GGGGCTAGTT
GATGCAGCCT CTGAGAGTGC GGCTGCCGAT CAACTGATGT CTCGCGGGGT GATCCCGCTC
GAGCTCGTGT TAGCAAAAGA GGTTAAGGAG TTTAATCTTA AGACTTTATT TAAAGGTAAA
GTCGCGTTAG AAGAGTTACA GATCTTCACT CGGCAGATGT ACTCACTGAC ACGTTCAGGC
ATTCCCATCT TACGAGCGAT TGCAGGTCTT TCTGAGACGA CACATTCTGT TCGCATGAAA
GAGGCGCTCG ATGATATTTC TGAACAGTTG ACCTCTGGCC GTCCTCTATC TTCGGCGATG
AATCAGCATC CTGATGTATT TGATGCGCTG TTTGTCTCTA TGGTTCATGT AGGTGAAAAC
ACCGGTAAGC TTGAGGATGC ATTTATTCAG TTATCTGGTT ATATCGAGCG TGAGCAGGAG
ACTCGAAGAC GCATCAAAGC GGCGATGCGT TATCCGATCT TTGTATTAAT CGCGATCGCC
ATAGCCATGG TGATCCTCAA CATTATGGTG ATCCCTAAAT TTGCCGAGAT GTTTTCCCGA
TTTGGCGCGG ATCTTCCTTG GGCGACTAAA CTATTAATTA ATACCTCTAA TGTGTTTGTT
AACTACTGGC CTTTAATGCT CCTCGTGCTG GTGGCGGGAT TCGTTGGCAT TCGCTATTGG
CATAGCACCG AAAAAGGTGA GAAGCAGTGG GATAAATGGA AGTTAAATAT TCCCGCTGTT
GGTAGCATCA TCGAACGTTC AACCCTCTCG CGCTATTGCC GCAGTTTCTC AATGATGTTG
AGTGCGGGTG TACCCATGAC CCAAGCCCTT AGTCTTGTGG CGGACGCCGT CGATAATGCT
TATATGCACG ACAGCATAGT GGGGATGCGT CGTGGTATCG AGTCCGGTGA GTCGATGTTA
AGAGTATCGA ATAACAGCCA ATTATTTACG CCACTTGTGC TGCAGATGGT GGCAGTGGGT
GAAGAAACGG GCCAGATCGA TCAGTTGCTT AATGATGCTG CAGATTTTTA TGAAGGTGAA
GTCGATTACG ACCTGAAGAA TTTGACTGCC AAGCTAGAGC CTCTTTTGAT CGGTTTTGTC
GCCTGTATCG TGTTGGTGTT GGCGCTGGGT ATTTACCTAC CTATGTGGGA CATGTTGAAT
GTGGTTAAGG GCGGTAACTG A
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| Protein sequence | MPTYQYRGRS AQGEQVKGLV DAASESAAAD QLMSRGVIPL ELVLAKEVKE FNLKTLFKGK
VALEELQIFT RQMYSLTRSG IPILRAIAGL SETTHSVRMK EALDDISEQL TSGRPLSSAM
NQHPDVFDAL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIA
IAMVILNIMV IPKFAEMFSR FGADLPWATK LLINTSNVFV NYWPLMLLVL VAGFVGIRYW
HSTEKGEKQW DKWKLNIPAV GSIIERSTLS RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDSIVGMR RGIESGESML RVSNNSQLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPLLIGFV ACIVLVLALG IYLPMWDMLN VVKGGN
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