| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3753 |
|---|
| Symbol | |
|---|
| ID | 5664138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4565332 |
|---|
| End bp | 4566219 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641238413 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_001503599 |
|---|
| Protein GI | 157963565 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000670381 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTA TTTTTGCTCG CGGTATTTCC AACCAATTTC GATTAACACT GGCTGTTATC
ATGTCAGTGA TTCTGCTTGT CGCTAACGAC AGGCTAGAGC CTGTGCGTAA TTCCCTCTCA
TCATTATTAA GCCCTTTGCA ATATGTGGCT AATATTCCCG GTGCCTTACT CGATCTTTCT
GCTGAAAGTC TCGCAACGCG CAATATGTTG GCTAAGCAGA ATAAAGAGTT ATTACGTCAT
CAACTCTTGA TGAGTGAACG CTTACAACGC TTTGAACACC TTCGCCAAGA AAACGATCGT
TTGCGTGGAT TACTCGGCTC GCCAGTGCAT ATGGATGCCA AGAAAGTTGT TGCCGAAGTC
ATGGAAGTGG CAAGCGACCC GTTTCGTCAA TATGTGGTAC TGAACCACGG TTCACGTAAC
GGCGTATTTG TTGGCCAACC TGTGGTCGAT GCTCAAGGTG TCGTTGGACA GGTTGTGCAG
GTGAGTGAGC TCACCAGTCG AGTGTTATTA CTTTCCGATA CCACCCACGG TATTCCGGTG
CGAATTACCC GAAACGATGT ACGCTTAATG GCGTTTGGAA CTGGTGTGCT CGATGAGTTA
GAGCTAAGAC ATGTGGCCAA GAGTACCGAT GTTCGTGTCG GCGATCTGCT GGTGTCTTCC
GGTCTTGGCA AGCGTTTTCC TGAAGGCTAC CCCGTGGCTC GAGTCATGAG TGTCGAAAAA
GATGATGGTA AGAATTACGC TACCGTTATC GCCCAACCGT TAGCGGCCTT AGACAGAATT
CGTTATCTGT TACTACTCTG GCCGGATATT GAGTCTGACG GAAAAGATCT TACTCCGCCT
GAGGAGATAG AAGAGGTCTT GAAGGCGAGT CAGGAGAGCA CTCAATGA
|
|---|
| Protein sequence | MKPIFARGIS NQFRLTLAVI MSVILLVAND RLEPVRNSLS SLLSPLQYVA NIPGALLDLS
AESLATRNML AKQNKELLRH QLLMSERLQR FEHLRQENDR LRGLLGSPVH MDAKKVVAEV
MEVASDPFRQ YVVLNHGSRN GVFVGQPVVD AQGVVGQVVQ VSELTSRVLL LSDTTHGIPV
RITRNDVRLM AFGTGVLDEL ELRHVAKSTD VRVGDLLVSS GLGKRFPEGY PVARVMSVEK
DDGKNYATVI AQPLAALDRI RYLLLLWPDI ESDGKDLTPP EEIEEVLKAS QESTQ
|
|---|
| |