| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3746 |
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| Symbol | |
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| ID | 5664131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4554355 |
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| End bp | 4555746 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238406 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001503592 |
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| Protein GI | 157963558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.622366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT CGTTGTGTGC TCTTTTGCTA GTCTTGCCGT TAACAGCCCA GGCTAAAACC
ATGGCCTTCG ATCAGGCTTG GCAGCAGCTG GTTAATGTCA GTGATAAATT GCAAGCGGGG
GCTCAAGAGG TCAATCGCGC AGCGGCCGAA CGAGATGCGG GTGAGGATAT GAACCTGCCC
TCAATTAACC TCACTGGTAG CTATACACGT TTAGAAAAGC CGATAGAATT AGATCTGCGG
GATCTTAATC CGCTTGCCTC CCTCGATCCT GCTAGCTTAC CGCCAGCCCT CGGTGGCGCC
CTCGCCGGGA TCCCGGGTTC AATGTTTGTC ACTCCCTTTA CCGAGCAAGA TATCTTTCGC
TCAAGCCTAC AGGCTATGTG GCCTATTTAC ACAGGTGGTA AAATTTCTGC AGCCCAAGGG
ATCCACGAGG CCCATGTTGC CGAGAAAGAG CAAGAGCTTA AGCTAACAAG CCGCGATCTA
TTTGTGCAGT TGGTTGACAG ATATTATGCC GTGGCAGTGA CTGAGGCGCT AACACAAACC
CAATCTGAGC TGGTGGACTC GCTCACGTTA CACGCATCTC AAGCCGAAAA GCTGGAACAG
CAAGGTCAAA TAGCCAAGGT TGAGCGACTC AACGCTCAAG TCGCACTGGA AAATGCCCGC
GTCAGTTATG GCAGTGCTAA ACGCCAGTCT GAAATGGCGA TGATCGCTCT GTCTAGAATG
CTGCATGAGC GAGAGGTCGA TACCACTTCG CCGTTATTTA TGTTGCATAG TGCGCCTTCA
TTACCGCAAT TGACGCAACT CACTCTTAAT CAACATCCTG CATTGAAGTT GCTCGAGGCT
AAAGAAGCGC AGGCTCAAGG CTTGGTTGAT GTCGAGAAAG GCAGCTATTT ACCGACGGTT
TTTCTATACG GTAATTACAC CCTCTATGAA GATGACAGCC TATTTTCCCA GATGGAACCG
GACTGGATGT TAGGAGTGGG AGTTACTGTG CCACTACTGA GCCGTGATGG GCGTGGTGGT
AAGGTGGAAG CGGCAAAGAG CGCGTTGTTG CAGGCTAGAT ATACTAAGGC GCAGACCCAA
CAAGATCTGA GCTTATTGTT GGATCAGAGT TATCGCCAGC TGTTGCAGGC GCAAGAAGAG
GTGGTGTCGC TAAACACATC CATGAGCCTA GCCCTAGAGA ATAAGCGACT TCGAGATATC
GCCTTTAAGC AGGGCCTGTC GACCTCAATC GAAAAGGTGG ATGCAGAGCT TAAGCTTAAC
GCGGTCGCCA CCCGGCAGCT TGGGGCGCAA TATCGATATG TACAAGCATA CGCAAGACTG
ATGGCAATAA GCGGTCAGCT TGATGAATTT ATAGGTAGAA GTATTAAGCA AGGGGACACC
AATGCGTACT AA
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| Protein sequence | MKRSLCALLL VLPLTAQAKT MAFDQAWQQL VNVSDKLQAG AQEVNRAAAE RDAGEDMNLP
SINLTGSYTR LEKPIELDLR DLNPLASLDP ASLPPALGGA LAGIPGSMFV TPFTEQDIFR
SSLQAMWPIY TGGKISAAQG IHEAHVAEKE QELKLTSRDL FVQLVDRYYA VAVTEALTQT
QSELVDSLTL HASQAEKLEQ QGQIAKVERL NAQVALENAR VSYGSAKRQS EMAMIALSRM
LHEREVDTTS PLFMLHSAPS LPQLTQLTLN QHPALKLLEA KEAQAQGLVD VEKGSYLPTV
FLYGNYTLYE DDSLFSQMEP DWMLGVGVTV PLLSRDGRGG KVEAAKSALL QARYTKAQTQ
QDLSLLLDQS YRQLLQAQEE VVSLNTSMSL ALENKRLRDI AFKQGLSTSI EKVDAELKLN
AVATRQLGAQ YRYVQAYARL MAISGQLDEF IGRSIKQGDT NAY
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