Gene Spea_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3734 
Symbol 
ID5664119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4537898 
End bp4539277 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content48% 
IMG OID641238394 
Productamino acid carrier protein 
Protein accessionYP_001503580 
Protein GI157963546 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTA TTACGAATTT TGTAAGCATG ATCAATGGCG TGGTCTGGGG GACTCCGATG 
TTGATTATGA TTCTGGGGGT CGGGTTACTC TTGACCATTG GGTTGCGGTT TATGCCGATT
TTAAAGTTAG GCACGGGTTT TAAGCTGCTA TGGTCTGGGC GTATTCCGGA TAAAGATAAG
AACATGAAAG GGGAGATTAG CCCTTTTAAT GCTTTGATGA CGTCACTGTC GGCGACTATA
GGTACAGGTA ATATTGCCGG TGTGGCTACC GCGATTTTTA TTGGTGGTCC AGGTGCTTTG
TTTTGGATGT GGTGTACGGC GTTGGTAGGA ATGGCGACTA AGTTTGCCGA AGCCGTGCTT
GCGGTTAAGT ATCGTGAAGT GGATGACAAT GGTAACCACG TTGGTGGTCC AATGTACTAC
ATCAAAAATG GTTTAGGGGC TAAATGGGCT TGGCTAGGTA CCGCCTTTGC ACTATTTGGT
TCTCTTGCCG GTTTTGGTAT CGGTAATACG GTTCAGGCTA ACTCGGTTGC CGATGCACTC
AGTAGTAATT TTGGCGTGCC AAATTGGATT ACGGGTGTGG TACTTATGGT GCTGGTTGGC
GCTGTACTTA TGGGCGGAAT TAAGCGTATT GCCGATGTTG CCGGCAAGCT CGTGCCAATG
ATGACGATTT TCTATCTCGC CGCAGGTGTT GCGGTTTTGG TGGTTTACGC TTCTGAGATC
CCTGCGGCAA TTGAGCTGAT TTTGCATAGC GCATTTAACC CTGTTGCTGC GCAAGGTGGC
TTTGCTGGAG CGGCGGTTTG GGCTGCGATT CGTTTTGGTG TGGCACGCGG TGTGTTCTCT
AATGAAGCTG GCCTAGGTAG TGCGCCGATT GCCCATGCTG CGGCGCAGAC TAACAATCCA
GTGGCACAAG GTTTAGTGGC CATGCTAGGC ACATTTATCG ATACCTTGAT TGTTTGTAGT
ATCACAGGTT TGGCTATTAT CGTTTCAGGT GCTTGGACTT CGGGTGAGAA CGGCGCAGCG
TTAACCTCTT TTGCTTTCTC TCATGCTTTC CCTATGGGTA ACTATGTAGT GGCAATTGCT
CTGAGTATTT TCGCCTTTAC TACGATTTTG GGCTGGAGCT TTTACTGTGA GAAGTGCGTG
CAGTTCCTGT TTGGCATTAA AGCCATCAAG CCATTTAGAA TTCTTTGGAC CATAGTGGTG
CCGTTAGGAG CAGTGAGTTC GCTGGAGTTT ATTTGGTTAT TGGCCGATAC GCTCAATGCC
ATGATGGCAA TTCCCAACCT GATCGCCTTG GCACTATTGA GTCCTGTGGT ATTTGCACTT
ACCAGAGAGT ACTTCTTGAA GAAGCGTCAG ACTGATTTAG AATCGCAAAA AGCCAAATAG
 
Protein sequence
MEAITNFVSM INGVVWGTPM LIMILGVGLL LTIGLRFMPI LKLGTGFKLL WSGRIPDKDK 
NMKGEISPFN ALMTSLSATI GTGNIAGVAT AIFIGGPGAL FWMWCTALVG MATKFAEAVL
AVKYREVDDN GNHVGGPMYY IKNGLGAKWA WLGTAFALFG SLAGFGIGNT VQANSVADAL
SSNFGVPNWI TGVVLMVLVG AVLMGGIKRI ADVAGKLVPM MTIFYLAAGV AVLVVYASEI
PAAIELILHS AFNPVAAQGG FAGAAVWAAI RFGVARGVFS NEAGLGSAPI AHAAAQTNNP
VAQGLVAMLG TFIDTLIVCS ITGLAIIVSG AWTSGENGAA LTSFAFSHAF PMGNYVVAIA
LSIFAFTTIL GWSFYCEKCV QFLFGIKAIK PFRILWTIVV PLGAVSSLEF IWLLADTLNA
MMAIPNLIAL ALLSPVVFAL TREYFLKKRQ TDLESQKAK