Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3734 |
Symbol | |
ID | 5664119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4537898 |
End bp | 4539277 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238394 |
Product | amino acid carrier protein |
Protein accession | YP_001503580 |
Protein GI | 157963546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCTA TTACGAATTT TGTAAGCATG ATCAATGGCG TGGTCTGGGG GACTCCGATG TTGATTATGA TTCTGGGGGT CGGGTTACTC TTGACCATTG GGTTGCGGTT TATGCCGATT TTAAAGTTAG GCACGGGTTT TAAGCTGCTA TGGTCTGGGC GTATTCCGGA TAAAGATAAG AACATGAAAG GGGAGATTAG CCCTTTTAAT GCTTTGATGA CGTCACTGTC GGCGACTATA GGTACAGGTA ATATTGCCGG TGTGGCTACC GCGATTTTTA TTGGTGGTCC AGGTGCTTTG TTTTGGATGT GGTGTACGGC GTTGGTAGGA ATGGCGACTA AGTTTGCCGA AGCCGTGCTT GCGGTTAAGT ATCGTGAAGT GGATGACAAT GGTAACCACG TTGGTGGTCC AATGTACTAC ATCAAAAATG GTTTAGGGGC TAAATGGGCT TGGCTAGGTA CCGCCTTTGC ACTATTTGGT TCTCTTGCCG GTTTTGGTAT CGGTAATACG GTTCAGGCTA ACTCGGTTGC CGATGCACTC AGTAGTAATT TTGGCGTGCC AAATTGGATT ACGGGTGTGG TACTTATGGT GCTGGTTGGC GCTGTACTTA TGGGCGGAAT TAAGCGTATT GCCGATGTTG CCGGCAAGCT CGTGCCAATG ATGACGATTT TCTATCTCGC CGCAGGTGTT GCGGTTTTGG TGGTTTACGC TTCTGAGATC CCTGCGGCAA TTGAGCTGAT TTTGCATAGC GCATTTAACC CTGTTGCTGC GCAAGGTGGC TTTGCTGGAG CGGCGGTTTG GGCTGCGATT CGTTTTGGTG TGGCACGCGG TGTGTTCTCT AATGAAGCTG GCCTAGGTAG TGCGCCGATT GCCCATGCTG CGGCGCAGAC TAACAATCCA GTGGCACAAG GTTTAGTGGC CATGCTAGGC ACATTTATCG ATACCTTGAT TGTTTGTAGT ATCACAGGTT TGGCTATTAT CGTTTCAGGT GCTTGGACTT CGGGTGAGAA CGGCGCAGCG TTAACCTCTT TTGCTTTCTC TCATGCTTTC CCTATGGGTA ACTATGTAGT GGCAATTGCT CTGAGTATTT TCGCCTTTAC TACGATTTTG GGCTGGAGCT TTTACTGTGA GAAGTGCGTG CAGTTCCTGT TTGGCATTAA AGCCATCAAG CCATTTAGAA TTCTTTGGAC CATAGTGGTG CCGTTAGGAG CAGTGAGTTC GCTGGAGTTT ATTTGGTTAT TGGCCGATAC GCTCAATGCC ATGATGGCAA TTCCCAACCT GATCGCCTTG GCACTATTGA GTCCTGTGGT ATTTGCACTT ACCAGAGAGT ACTTCTTGAA GAAGCGTCAG ACTGATTTAG AATCGCAAAA AGCCAAATAG
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Protein sequence | MEAITNFVSM INGVVWGTPM LIMILGVGLL LTIGLRFMPI LKLGTGFKLL WSGRIPDKDK NMKGEISPFN ALMTSLSATI GTGNIAGVAT AIFIGGPGAL FWMWCTALVG MATKFAEAVL AVKYREVDDN GNHVGGPMYY IKNGLGAKWA WLGTAFALFG SLAGFGIGNT VQANSVADAL SSNFGVPNWI TGVVLMVLVG AVLMGGIKRI ADVAGKLVPM MTIFYLAAGV AVLVVYASEI PAAIELILHS AFNPVAAQGG FAGAAVWAAI RFGVARGVFS NEAGLGSAPI AHAAAQTNNP VAQGLVAMLG TFIDTLIVCS ITGLAIIVSG AWTSGENGAA LTSFAFSHAF PMGNYVVAIA LSIFAFTTIL GWSFYCEKCV QFLFGIKAIK PFRILWTIVV PLGAVSSLEF IWLLADTLNA MMAIPNLIAL ALLSPVVFAL TREYFLKKRQ TDLESQKAK
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