Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3730 |
Symbol | |
ID | 5664115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4535148 |
End bp | 4535945 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238390 |
Product | response regulator receiver protein |
Protein accession | YP_001503576 |
Protein GI | 157963542 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCATT TACAGCCAAG CGAACTATCA ATCTTGTTGG TCGAGCCATC AGACACCCAA AGAAAAATTA TCTGTCAGCG CCTCGAACAG GAGGGGGTTA AACAGATCCA AACCGCCAAT AACCTTACCG AGGCTCTTAA GGTCATTAAT CGTCATCAGC CCGATCTTGT TGCCAGTGCC ATGCATTATG AAGATGGTAC CGCATTGGAG TTGCTGCAAC AGATCAAGTC ATCGCAGCAT TTTAGCGATA TTCAATTTAT GCTGGTCTCT AGCGAGTGTC GCCGCGAGCA GCTTGAAAGC TATCGCCAAT CTGGTGTGGT CGCCATACTA CCTAAACCTT TTACCGCAGA ACATTTGGGC AAGGCATTAA ATGCCACTAT CGATCTTCTC AGCCATGACG AATTAGATTT GACCCACTTT GATGTGCAAG ACTTACGTGT TCTGGTAGTC GATGATAGCA AGATGGCACG TAACATCATT AAGCGCACCA TTACCAATCT CGGCTTAAGA CTCATCACCG AGGCTGAGGA TGGCCAACAA GCCATTGAAC TGATGCAACA GCAGATGTTC GACTTAGTGA TCACCGACTA CAACATGCCA AGTGTCGATG GTCTGGCACT GACTCAGTTT ATTCGCAACG ACAGCCAGCA ATCCCATATT CCTATCTTGA TGGTGTCATC GGAAGCTAAT GAGACCCACT TAAATAACGT ATCTCAGGCC GGAGTTAACG CGCTGTGTGA CAAACCTTTT GAGCCAAATA CCGTGAAACA GATCCTCTAT CAGCTGTTAG AAGAGTAA
|
Protein sequence | MRHLQPSELS ILLVEPSDTQ RKIICQRLEQ EGVKQIQTAN NLTEALKVIN RHQPDLVASA MHYEDGTALE LLQQIKSSQH FSDIQFMLVS SECRREQLES YRQSGVVAIL PKPFTAEHLG KALNATIDLL SHDELDLTHF DVQDLRVLVV DDSKMARNII KRTITNLGLR LITEAEDGQQ AIELMQQQMF DLVITDYNMP SVDGLALTQF IRNDSQQSHI PILMVSSEAN ETHLNNVSQA GVNALCDKPF EPNTVKQILY QLLEE
|
| |