Gene Spea_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3730 
Symbol 
ID5664115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4535148 
End bp4535945 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID641238390 
Productresponse regulator receiver protein 
Protein accessionYP_001503576 
Protein GI157963542 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCATT TACAGCCAAG CGAACTATCA ATCTTGTTGG TCGAGCCATC AGACACCCAA 
AGAAAAATTA TCTGTCAGCG CCTCGAACAG GAGGGGGTTA AACAGATCCA AACCGCCAAT
AACCTTACCG AGGCTCTTAA GGTCATTAAT CGTCATCAGC CCGATCTTGT TGCCAGTGCC
ATGCATTATG AAGATGGTAC CGCATTGGAG TTGCTGCAAC AGATCAAGTC ATCGCAGCAT
TTTAGCGATA TTCAATTTAT GCTGGTCTCT AGCGAGTGTC GCCGCGAGCA GCTTGAAAGC
TATCGCCAAT CTGGTGTGGT CGCCATACTA CCTAAACCTT TTACCGCAGA ACATTTGGGC
AAGGCATTAA ATGCCACTAT CGATCTTCTC AGCCATGACG AATTAGATTT GACCCACTTT
GATGTGCAAG ACTTACGTGT TCTGGTAGTC GATGATAGCA AGATGGCACG TAACATCATT
AAGCGCACCA TTACCAATCT CGGCTTAAGA CTCATCACCG AGGCTGAGGA TGGCCAACAA
GCCATTGAAC TGATGCAACA GCAGATGTTC GACTTAGTGA TCACCGACTA CAACATGCCA
AGTGTCGATG GTCTGGCACT GACTCAGTTT ATTCGCAACG ACAGCCAGCA ATCCCATATT
CCTATCTTGA TGGTGTCATC GGAAGCTAAT GAGACCCACT TAAATAACGT ATCTCAGGCC
GGAGTTAACG CGCTGTGTGA CAAACCTTTT GAGCCAAATA CCGTGAAACA GATCCTCTAT
CAGCTGTTAG AAGAGTAA
 
Protein sequence
MRHLQPSELS ILLVEPSDTQ RKIICQRLEQ EGVKQIQTAN NLTEALKVIN RHQPDLVASA 
MHYEDGTALE LLQQIKSSQH FSDIQFMLVS SECRREQLES YRQSGVVAIL PKPFTAEHLG
KALNATIDLL SHDELDLTHF DVQDLRVLVV DDSKMARNII KRTITNLGLR LITEAEDGQQ
AIELMQQQMF DLVITDYNMP SVDGLALTQF IRNDSQQSHI PILMVSSEAN ETHLNNVSQA
GVNALCDKPF EPNTVKQILY QLLEE