Gene Spea_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3704 
Symbol 
ID5664089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4509266 
End bp4512172 
Gene Length2907 bp 
Protein Length968 aa 
Translation table11 
GC content49% 
IMG OID641238364 
ProductATP-dependent helicase HepA 
Protein accessionYP_001503550 
Protein GI157963516 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTT CCTTAGGTCA ACGTTGGATC AGTGACACCG AATCAGAATT AGGTTTAGGT 
ACCGTAGTTG GAGTTGAAGG TCGCATGGTG ACCGTTCTTT TCCCTGCAAC TGGCGAGAAT
AGATTGTTCT CCCGTACAGA AGCCCCACTC ACACGTGTTA TTTATAACCC AGGTGATACC
GTAGAGAGCC ACGAAGAGTG GAAGTTGACG GTAACCGAAG TTGAAGAAAA AGATTCACTG
ATTATTTACC ACGGCACCCA TAGCGAAACT GGCGAACAAG TTAGCCTGCG CGAAACCTTG
TTGAATCACA ATATCCGCTT CAATAAGCCA CAGGATCGTC TGTTTGCCGG CCAAATAGAC
CGCTTAGATA GATTCAATGT GCGCTACCAG TGCCAACTGC TACGCAATAA GTTAGCGACA
TCCGATCTGC TGGGACTGCA AGGGCCACGT GTTGGATTGA TCCCGCATCA ACAATGGATT
GCACACGAAG TCGGTCAACG TTTTGCGCCT CGCGTATTGC TTGCCGATGA AGTAGGTCTA
GGTAAGACCA TCGAAGCAGG TTTGATTATC CACCAGCAGC TACTGACTGG CCGCGCCGAG
CGTATCTTAG TTATCGTGCC TGACACACTG CGTCACCAGT GGTTAGTTGA GATGCTACGC
CGCTTTAACT TGCGCTTCTC TGTGTTCGAC GAAGATCGCT GTGTCGAGGC TTACGCCGAT
CACGACAATC CTTTTTATAC CGAGCAGCTA GTGATCTGTT CACTGGATCT ATTGCGTAAG
AAGCGTCGTT TAGATCAAGC CCTAGATGCC GACTGGGATC TAATGGTTGT CGATGAAGCC
CATCACTTAG AGTGGTCGGA AGAAGCGCCT AGCCGTGCTT ACCAGATCGT TGAAGCATTG
AGTGAAGAGA TCCCAGGCGT ACTGTTGCTA ACCGCAACCC CAGATCAATT AGGCCACCAG
AGCCACTTTG CGCGTCTGCG TCTACTGGAT CCGGATCGTT TCTACGACTA TGAAGCCTTC
TTAAAAGAAG AAGACAGCTA CAAAGACGTC GCGACTGCTG CCGATGCCCT AGCCTCTGGC
GAGATACTGT CGGATGAGTC GATAGCCGGT TTAACCCAGC TTCTGGCTGA GAAAGATATC
AGCGCGTCAA TTACGCTAAT TCAAGACGAT GCGGCCGATG CTGACAGTCG CTTCCAAGCT
CGTGATGAGC TACTGCAAGA TCTGCTAGAC CGTCATGGTA CAGGCCGCGT GCTTTACCGT
AACAGCCGTG CGTCGGTAAA AGGCTTCCCT GTGCGTAACT TGCATGTGCA TCCACAAAAG
ATGCCAGAGC AGTATGTTAC CGCTTACCGC GTTAGCTCTA TGATGAACAA GCATTTAGAC
ACTAATGCTA AAGTTCGCCA AGTATTAAGC CCTGAGAAGA TCTACCAAGA CTTTGACAGT
GGCAGTGCGG CATGGTGGAA GTTCGATCCA CGTGTGGATT GGTTGATCGA CTTCTTAAAG
AACAACCGTA GCAAGAAAGT ACTGATTATC GCTAGCCAAG CCGAAACGGC ATTGAGCCTA
GAAGAAGCCC TGCGTACTCG TGAAGGTATT CAAGCAACTG TCTTCCATGA AGGCATGTCG
ATCATCGAAC GCGATAAGGC TGGAGCCTAC TTTGCGCAAG AGTCAGGTGG TGCACAGGCG
CTTATCTGCT CTGAGATCGG TTCAGAAGGT CGTAACTTCC AGTTCGCCAG CAACCTAGTA
TTGTTCGATC TGCCGTTAAA CCCAGATCTA CTAGAGCAGC GTATCGGTCG TCTAGATCGT
ATCGGTCAGA AGAACGATGT TGAGATCCAC CTACCTTTCT TAGCCAATAC CGCGCAAGAA
AGATTGATGC AGTGGTATCA CCAGGGGCTA AATGCCTTTG AGTGCACCTG CCCAAGTGGT
CACATTCTAT TTAACGAGTT CTCAGGTGAG CTATTAGAGA GCCTGCTTAA TAATGATGAA
GCGGTTCTTG AAAGCCTACT CGATGGCACT AAGGCGCGTT ATCAAGAGCT GAAAGTGGCG
ATGGAACAAG GTCGCGATAA ACTGCTTGAG ATCAACTCTC ACGGCGGTGA GCGAGCCAAC
CAGCTAGTGA AAACTCTAGC GGATAAAGAT GAAGATACCC AGCTTATTGG CTCTGTGATC
CGTCTTTGGG ACATTATCGG TGTCGAGCAA GAAGATAGCG GCGAGAACGC CATCGTATTG
CACCCAAGCG AGCACATGAT GTTCCCGACA TACCCTGGTC TACCTGAAGA TGGTATTACC
GTGACTTTCG ATCGTGAGAT GGCACTGTCT CGTGATGATA TCGCGCTAAT TACTCAGGAG
CATCCGTTAG TACAGACGGG GCTTGATCTG ATCACTTCAT CAGAAACCGG TACCACCAGC
GTTGCAGTAC TGAAGAACAA GGCGCTGCCA GCGGGCACTA TATTCCTTGA GCTTATCTAC
CTAGCCGATG CATCAGCACC TAAGTCGAGC CAGCTTTACC GTTATTTGCC ACCAACACCT
ATCCGCGTGT TGCTCGATAA AAACGGCAAC AACCTGTCTG ACAATGTGAC GTATGAGAGC
TTTAACAAGC AACTCAGTGC GGTTAATCGT CATATCGCCA GTAAGTTGGT CAATGCATCA
CAAGCTATCT TGCACCCACT TTTTGCTAAG GCAGAGAGCT TTGCGACGAC TCAGCTTGAA
ACCCTTACTG AGTGTGCTCG TGAGAAAATG ACTAGCCAAC TATCTGGTGA GCTTGAACGC
TTGAAGGCGC TAAAAGCGGT TAATCCAAAT ATTCGTGATG AAGAACTAAG TCACCTAAGC
GAACAGATGG CTGAGTTAAA CCGTTACTTA GATAGTAGCC AGCTACAACT CGATGCCATT
AGACTGGTGT TAGTTAGCCA CGCTTAA
 
Protein sequence
MPFSLGQRWI SDTESELGLG TVVGVEGRMV TVLFPATGEN RLFSRTEAPL TRVIYNPGDT 
VESHEEWKLT VTEVEEKDSL IIYHGTHSET GEQVSLRETL LNHNIRFNKP QDRLFAGQID
RLDRFNVRYQ CQLLRNKLAT SDLLGLQGPR VGLIPHQQWI AHEVGQRFAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RILVIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD
HDNPFYTEQL VICSLDLLRK KRRLDQALDA DWDLMVVDEA HHLEWSEEAP SRAYQIVEAL
SEEIPGVLLL TATPDQLGHQ SHFARLRLLD PDRFYDYEAF LKEEDSYKDV ATAADALASG
EILSDESIAG LTQLLAEKDI SASITLIQDD AADADSRFQA RDELLQDLLD RHGTGRVLYR
NSRASVKGFP VRNLHVHPQK MPEQYVTAYR VSSMMNKHLD TNAKVRQVLS PEKIYQDFDS
GSAAWWKFDP RVDWLIDFLK NNRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQESGGAQA LICSEIGSEG RNFQFASNLV LFDLPLNPDL LEQRIGRLDR
IGQKNDVEIH LPFLANTAQE RLMQWYHQGL NAFECTCPSG HILFNEFSGE LLESLLNNDE
AVLESLLDGT KARYQELKVA MEQGRDKLLE INSHGGERAN QLVKTLADKD EDTQLIGSVI
RLWDIIGVEQ EDSGENAIVL HPSEHMMFPT YPGLPEDGIT VTFDREMALS RDDIALITQE
HPLVQTGLDL ITSSETGTTS VAVLKNKALP AGTIFLELIY LADASAPKSS QLYRYLPPTP
IRVLLDKNGN NLSDNVTYES FNKQLSAVNR HIASKLVNAS QAILHPLFAK AESFATTQLE
TLTECAREKM TSQLSGELER LKALKAVNPN IRDEELSHLS EQMAELNRYL DSSQLQLDAI
RLVLVSHA