Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3704 |
Symbol | |
ID | 5664089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4509266 |
End bp | 4512172 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238364 |
Product | ATP-dependent helicase HepA |
Protein accession | YP_001503550 |
Protein GI | 157963516 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTTTT CCTTAGGTCA ACGTTGGATC AGTGACACCG AATCAGAATT AGGTTTAGGT ACCGTAGTTG GAGTTGAAGG TCGCATGGTG ACCGTTCTTT TCCCTGCAAC TGGCGAGAAT AGATTGTTCT CCCGTACAGA AGCCCCACTC ACACGTGTTA TTTATAACCC AGGTGATACC GTAGAGAGCC ACGAAGAGTG GAAGTTGACG GTAACCGAAG TTGAAGAAAA AGATTCACTG ATTATTTACC ACGGCACCCA TAGCGAAACT GGCGAACAAG TTAGCCTGCG CGAAACCTTG TTGAATCACA ATATCCGCTT CAATAAGCCA CAGGATCGTC TGTTTGCCGG CCAAATAGAC CGCTTAGATA GATTCAATGT GCGCTACCAG TGCCAACTGC TACGCAATAA GTTAGCGACA TCCGATCTGC TGGGACTGCA AGGGCCACGT GTTGGATTGA TCCCGCATCA ACAATGGATT GCACACGAAG TCGGTCAACG TTTTGCGCCT CGCGTATTGC TTGCCGATGA AGTAGGTCTA GGTAAGACCA TCGAAGCAGG TTTGATTATC CACCAGCAGC TACTGACTGG CCGCGCCGAG CGTATCTTAG TTATCGTGCC TGACACACTG CGTCACCAGT GGTTAGTTGA GATGCTACGC CGCTTTAACT TGCGCTTCTC TGTGTTCGAC GAAGATCGCT GTGTCGAGGC TTACGCCGAT CACGACAATC CTTTTTATAC CGAGCAGCTA GTGATCTGTT CACTGGATCT ATTGCGTAAG AAGCGTCGTT TAGATCAAGC CCTAGATGCC GACTGGGATC TAATGGTTGT CGATGAAGCC CATCACTTAG AGTGGTCGGA AGAAGCGCCT AGCCGTGCTT ACCAGATCGT TGAAGCATTG AGTGAAGAGA TCCCAGGCGT ACTGTTGCTA ACCGCAACCC CAGATCAATT AGGCCACCAG AGCCACTTTG CGCGTCTGCG TCTACTGGAT CCGGATCGTT TCTACGACTA TGAAGCCTTC TTAAAAGAAG AAGACAGCTA CAAAGACGTC GCGACTGCTG CCGATGCCCT AGCCTCTGGC GAGATACTGT CGGATGAGTC GATAGCCGGT TTAACCCAGC TTCTGGCTGA GAAAGATATC AGCGCGTCAA TTACGCTAAT TCAAGACGAT GCGGCCGATG CTGACAGTCG CTTCCAAGCT CGTGATGAGC TACTGCAAGA TCTGCTAGAC CGTCATGGTA CAGGCCGCGT GCTTTACCGT AACAGCCGTG CGTCGGTAAA AGGCTTCCCT GTGCGTAACT TGCATGTGCA TCCACAAAAG ATGCCAGAGC AGTATGTTAC CGCTTACCGC GTTAGCTCTA TGATGAACAA GCATTTAGAC ACTAATGCTA AAGTTCGCCA AGTATTAAGC CCTGAGAAGA TCTACCAAGA CTTTGACAGT GGCAGTGCGG CATGGTGGAA GTTCGATCCA CGTGTGGATT GGTTGATCGA CTTCTTAAAG AACAACCGTA GCAAGAAAGT ACTGATTATC GCTAGCCAAG CCGAAACGGC ATTGAGCCTA GAAGAAGCCC TGCGTACTCG TGAAGGTATT CAAGCAACTG TCTTCCATGA AGGCATGTCG ATCATCGAAC GCGATAAGGC TGGAGCCTAC TTTGCGCAAG AGTCAGGTGG TGCACAGGCG CTTATCTGCT CTGAGATCGG TTCAGAAGGT CGTAACTTCC AGTTCGCCAG CAACCTAGTA TTGTTCGATC TGCCGTTAAA CCCAGATCTA CTAGAGCAGC GTATCGGTCG TCTAGATCGT ATCGGTCAGA AGAACGATGT TGAGATCCAC CTACCTTTCT TAGCCAATAC CGCGCAAGAA AGATTGATGC AGTGGTATCA CCAGGGGCTA AATGCCTTTG AGTGCACCTG CCCAAGTGGT CACATTCTAT TTAACGAGTT CTCAGGTGAG CTATTAGAGA GCCTGCTTAA TAATGATGAA GCGGTTCTTG AAAGCCTACT CGATGGCACT AAGGCGCGTT ATCAAGAGCT GAAAGTGGCG ATGGAACAAG GTCGCGATAA ACTGCTTGAG ATCAACTCTC ACGGCGGTGA GCGAGCCAAC CAGCTAGTGA AAACTCTAGC GGATAAAGAT GAAGATACCC AGCTTATTGG CTCTGTGATC CGTCTTTGGG ACATTATCGG TGTCGAGCAA GAAGATAGCG GCGAGAACGC CATCGTATTG CACCCAAGCG AGCACATGAT GTTCCCGACA TACCCTGGTC TACCTGAAGA TGGTATTACC GTGACTTTCG ATCGTGAGAT GGCACTGTCT CGTGATGATA TCGCGCTAAT TACTCAGGAG CATCCGTTAG TACAGACGGG GCTTGATCTG ATCACTTCAT CAGAAACCGG TACCACCAGC GTTGCAGTAC TGAAGAACAA GGCGCTGCCA GCGGGCACTA TATTCCTTGA GCTTATCTAC CTAGCCGATG CATCAGCACC TAAGTCGAGC CAGCTTTACC GTTATTTGCC ACCAACACCT ATCCGCGTGT TGCTCGATAA AAACGGCAAC AACCTGTCTG ACAATGTGAC GTATGAGAGC TTTAACAAGC AACTCAGTGC GGTTAATCGT CATATCGCCA GTAAGTTGGT CAATGCATCA CAAGCTATCT TGCACCCACT TTTTGCTAAG GCAGAGAGCT TTGCGACGAC TCAGCTTGAA ACCCTTACTG AGTGTGCTCG TGAGAAAATG ACTAGCCAAC TATCTGGTGA GCTTGAACGC TTGAAGGCGC TAAAAGCGGT TAATCCAAAT ATTCGTGATG AAGAACTAAG TCACCTAAGC GAACAGATGG CTGAGTTAAA CCGTTACTTA GATAGTAGCC AGCTACAACT CGATGCCATT AGACTGGTGT TAGTTAGCCA CGCTTAA
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Protein sequence | MPFSLGQRWI SDTESELGLG TVVGVEGRMV TVLFPATGEN RLFSRTEAPL TRVIYNPGDT VESHEEWKLT VTEVEEKDSL IIYHGTHSET GEQVSLRETL LNHNIRFNKP QDRLFAGQID RLDRFNVRYQ CQLLRNKLAT SDLLGLQGPR VGLIPHQQWI AHEVGQRFAP RVLLADEVGL GKTIEAGLII HQQLLTGRAE RILVIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD HDNPFYTEQL VICSLDLLRK KRRLDQALDA DWDLMVVDEA HHLEWSEEAP SRAYQIVEAL SEEIPGVLLL TATPDQLGHQ SHFARLRLLD PDRFYDYEAF LKEEDSYKDV ATAADALASG EILSDESIAG LTQLLAEKDI SASITLIQDD AADADSRFQA RDELLQDLLD RHGTGRVLYR NSRASVKGFP VRNLHVHPQK MPEQYVTAYR VSSMMNKHLD TNAKVRQVLS PEKIYQDFDS GSAAWWKFDP RVDWLIDFLK NNRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS IIERDKAGAY FAQESGGAQA LICSEIGSEG RNFQFASNLV LFDLPLNPDL LEQRIGRLDR IGQKNDVEIH LPFLANTAQE RLMQWYHQGL NAFECTCPSG HILFNEFSGE LLESLLNNDE AVLESLLDGT KARYQELKVA MEQGRDKLLE INSHGGERAN QLVKTLADKD EDTQLIGSVI RLWDIIGVEQ EDSGENAIVL HPSEHMMFPT YPGLPEDGIT VTFDREMALS RDDIALITQE HPLVQTGLDL ITSSETGTTS VAVLKNKALP AGTIFLELIY LADASAPKSS QLYRYLPPTP IRVLLDKNGN NLSDNVTYES FNKQLSAVNR HIASKLVNAS QAILHPLFAK AESFATTQLE TLTECAREKM TSQLSGELER LKALKAVNPN IRDEELSHLS EQMAELNRYL DSSQLQLDAI RLVLVSHA
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