Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3702 |
Symbol | |
ID | 5664087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4503657 |
End bp | 4507361 |
Gene Length | 3705 bp |
Protein Length | 1234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238362 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001503548 |
Protein GI | 157963514 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA TTGAGCCGAC TCTTCAGCTA AAGTCAACGA TTCAAAAGAA CTATAACAGA GCGGTTTTTT ACACCTATAT CGGCGTAATC ATCATGGCTT TGGCGACAGC TTGGGTGTCA TTTGACCGCC AAAAGGCCCA GTTGGTCGAG CAGACCGAAG AGATGGTTGA GCGCCATGTA CTACAAGTGG ACTTGCTGCT TGAGTCGAGT ATGAAAGCCG TTACCAGTTT GCGTAACGTT GCTGTCGACC ATTTACGTTT AGGCGAGTTG GTGCGTAAAG ACCGACTGCC GCAATATGAA AAGTTTAATG AAAGTGGTCA GTTCTTTACC TTGGAGCCTG CCTACGCCAA GAGTGGTGAG CCGTTTACCA ACATGGGCCG CATTACCGGT TCAGGCTCGC TAAATGGTCG TAGCGACAAG TTCTATCAAG AGCTTGAGAT GCTGTTTGAG CTTTCTCTGT CGTTCCCTGT GGCTAACGAA GCCGCGCCAA AAGCCTCATC GATTTACTAC ATCTCTAAAC GACGCATCAT GTCTTATTTC CCGTGGCCGT CAGATGAACA ACGTTTTCGA GATGAACTAC TTAATAAGAA GCAGTTTCAG CTAGTCACAC CATCAAATAA TCCTCAGCGC AGTGTCGCCT GGAGCCCTGC CTACGTTGAA GCTACGGGGA AAGGATTGCT GACCACCCTA GGGATCCCCA TCTATCTAGA AGACGAGTTT ATCGGCTCGA TTAACTTAGA TATGACCCTT GCTTCATTGC GTAAGCAAAT TCGCCTCTAT TTTAAAATGC CCGGCACGGT GATCTTGCTG GATCAAAACA ACAATATTCT GACCCATAGT GATATCGATA CCTCAGATGT AAACCGCGTC TATCACATTA GTCAGAAGAT CCCATCTGAG CTGCATTCGA TCCCAGAGTC TGAGTTATTC GATGCCCACG AAGGCATTAT TCGTAACGGC TATTATATCC ACTCGGTGGC GCTACATAAC GCACCGTGGC GCTTGCTCTA TCTACAAGAT GTCGATGAAT TATTTAAAGA TTCATGGGAA AAACTGGAGC TCACTTTCGT GCTGGTGGTA ATGGCGTTAT CGGTGTTGGT GACGATTGTT CACTGGCTGA CGCGTCGCTC ATTCGTTAAC CCTGCCTCTA GATTATTGAC CCATTTAGAG GAGTGCTCGG CCGAGCCTAT TAAGCCGCCA GAGAAGATCA CCGTAGGTTG GGCTCCCTGG TTCCAGCTGG TGAGCCGGAT TTTTGAAGAG AATAAACAGT ATACGCGCCA CTTGGCGGAG CAAAACAGGC GACTCGATAA GCTAGTGGCC CAGCGTACCG AAAGGCTAAA AGACACCACC GAGCGGCGTG AGCAGGAATA TGTCTTGCTA CGATCGCTAT TGGACTCGAT CCCAGAGGCG ATTGTCTTTA AAGATAAAGA GGGTCGCTAC CTAGGCTGCA ACAAGTCGGC GGAGCGCATG CTGGGCTTTA GCGAGAGTGA GATGATCGGC CAGTTCTCCG ATGCCTTGAC GGCCGATGAG CAGTCGGCAC GAATTCGCGC CGAAGATGAA CGGGTACTGA CCGAGAGAAC ACCGCTTCGT TACCAAGAGA AGGTAGAGCT TGCGGGTAAG CCTGTACTGC TCGACACCTT GAAGATCCCA TTCTACAACC GTCGTGGCGA ACTACTGGGT TTGATTGCCG TCTGGCGTGA TGTGACTCGT GAGTACGAGT CGGCAGAGCA GCTACGTCTA TCGGAAGAGC GTTATCATCT TGCCATGGAC GCGGTAGAAG ATGTTCTGTG GGACTGGTAT TTAGACTCGG AGCAGATCAT CTGTAATCCG GCTTACTATT CGATGCTGGG TTACAAGGTC AATGAATTCC CTGCCTTGGT GTCGACTATC GATGAGCTTA TTCATCCGGA CGATCGTATA AGAGTGGAGG AGTATCGCGA GCAATATCTT GCTAATCCAG TCGGTGCTTT CGATATAGAA TTTAGAATGT TAGGTAAGAG CGGCGGTTAT CACTGGTTAC TTTCTCGTGG CCGAGTGGTG GAATACACCC CTAACAACCA ACCTAAGCGT ATGTTGGGAA CTCACAAGGA TATTACCCGC CATAAACGCA ACGAAGTCGC CATGCTCGAG GCCAAGCAGG ACGCTGAGAT GGCGAACCTG TATAAGAGTG AATTCTTGGC TAACATGAGT CATGAAATTC GTACGCCAAT GAACGCCATT ATAGGTATGT TGCAGCTCGC ACAGCGCACC TCGCTCACGC CGCAGCAGAA AGATTACCTA GAGAAGGCTG GCTTCTCGGC GCACTCATTG CTGCGGATCA TCAACGACAT CTTGGATTTC TCTAAGATCG AGGCGGGTAA GTTAGAGCTT GAGCGCGTAG CCTTTCCGCT GGACAAGGTG TTGGATCATG CGCTGGATCT TAACGCGCTA AAGGCGCAAG AGAAGGGAGT CGAGCTACTG CTTTATGCAC CAGTGACCGC AGGCTTGATC TTAGAAGGCG ATCCGCTGCG TCTCGGGCAG GTACTGATTA ACTTACTGTC GAATGCGGTG AAGTTTACTC AGTCCGGTGA GATTGAACTT GGCTGTGAAG ATGTGGGCGA GAGAGATCAT CGTATTACGC TCAAGTTCTG GATCCGCGAT ACCGGGATCG GGATCAGTAA AGAGCAACAA GCGACGCTGT TCGATGCCTT TGCTCAGGCC GATGGTTCTA CCACCCGTAA ATATGGTGGT ACTGGGCTTG GCTTATCTAT CAGTAAGCAC TTAGTGTCAC TGATGGGCGG CACCATGCAG GTCGAGAGCG AGATGAGTGT GGGCAGTACC TTTAGCTTCA CCATTAGCTT TGAGATTGCC GAAGAAGGCG AGGTGCTACC TCTAGTGGTG CCTGAGACCT TAGGTAACCT AAAGACCTTA GTTATCGATG ATAACCCGAC GGCGCTGCAG ATCTATTCGA GTGTGATGCG AGACTTCCAC TTTAATGTCG ATACCGCCGC CAGCGGCCCC GAGGGCTTAT ATAAACTAAG TAAGAACCCT GTAGATCTGC TATTGCTCGA CTGGATGATG CCAGAGATGG ACGGCGTCGA GGTGATCAAG CAGATCGATC AGATGGTAGC CGATGGCCGT TTAGAGAAGC GGCCCATTAT CATCATGATG ACTGCTTACA CCGCAGAGCC GATGCAAAAA GATGTGGAGG CGGCCAACGT CTTCGCCCTG CTGCAGAAAC CGTTTAAGGC CTCTTCGCTA TTCGATGAGA TTATCTCGGC CTTCGCCGAT GAGCCGAGTT TAAATCCGTT ACCGGAGGCT AATGAAGAGG AAGCCGACCA AGACGCTGGC TATGTGCTGC TGGTGGAAGA TAACTTTATC AACCAACAGG TAGCTACCGA GCTGCTTAAG AGTGCAGGTT ACACGGTCGA TGTTGCCGAA AACGGCCAAA TTGCCCTGGA TATGCTTGAT AAGGCCAAGT ATGACGCGGT GTTGATGGAT ATTCAGATGC CAGTGATGGA CGGTCTTACT GCGACCAAGG AGCTTAGAAA ACGCTACCCT GTCGACGAGT TACCTGTGAT CGCGATGACG GCTCATGCCA TGTCGGGTGA CAGAGAGAAG AGTTTGGCTG CAGGAATGAA CGCTCATATT ACTAAACCAA TCGTGCTCAC CGAGTTGTTT GACACCTTGA GCCACTGGAT TGGTGAGTGT GGCAGGAAGT CTTAA
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Protein sequence | MKPIEPTLQL KSTIQKNYNR AVFYTYIGVI IMALATAWVS FDRQKAQLVE QTEEMVERHV LQVDLLLESS MKAVTSLRNV AVDHLRLGEL VRKDRLPQYE KFNESGQFFT LEPAYAKSGE PFTNMGRITG SGSLNGRSDK FYQELEMLFE LSLSFPVANE AAPKASSIYY ISKRRIMSYF PWPSDEQRFR DELLNKKQFQ LVTPSNNPQR SVAWSPAYVE ATGKGLLTTL GIPIYLEDEF IGSINLDMTL ASLRKQIRLY FKMPGTVILL DQNNNILTHS DIDTSDVNRV YHISQKIPSE LHSIPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQD VDELFKDSWE KLELTFVLVV MALSVLVTIV HWLTRRSFVN PASRLLTHLE ECSAEPIKPP EKITVGWAPW FQLVSRIFEE NKQYTRHLAE QNRRLDKLVA QRTERLKDTT ERREQEYVLL RSLLDSIPEA IVFKDKEGRY LGCNKSAERM LGFSESEMIG QFSDALTADE QSARIRAEDE RVLTERTPLR YQEKVELAGK PVLLDTLKIP FYNRRGELLG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDVLWDWY LDSEQIICNP AYYSMLGYKV NEFPALVSTI DELIHPDDRI RVEEYREQYL ANPVGAFDIE FRMLGKSGGY HWLLSRGRVV EYTPNNQPKR MLGTHKDITR HKRNEVAMLE AKQDAEMANL YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTPQQKDYL EKAGFSAHSL LRIINDILDF SKIEAGKLEL ERVAFPLDKV LDHALDLNAL KAQEKGVELL LYAPVTAGLI LEGDPLRLGQ VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWIRD TGIGISKEQQ ATLFDAFAQA DGSTTRKYGG TGLGLSISKH LVSLMGGTMQ VESEMSVGST FSFTISFEIA EEGEVLPLVV PETLGNLKTL VIDDNPTALQ IYSSVMRDFH FNVDTAASGP EGLYKLSKNP VDLLLLDWMM PEMDGVEVIK QIDQMVADGR LEKRPIIIMM TAYTAEPMQK DVEAANVFAL LQKPFKASSL FDEIISAFAD EPSLNPLPEA NEEEADQDAG YVLLVEDNFI NQQVATELLK SAGYTVDVAE NGQIALDMLD KAKYDAVLMD IQMPVMDGLT ATKELRKRYP VDELPVIAMT AHAMSGDREK SLAAGMNAHI TKPIVLTELF DTLSHWIGEC GRKS
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