| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3696 |
|---|
| Symbol | |
|---|
| ID | 5664081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4495885 |
|---|
| End bp | 4498962 |
|---|
| Gene Length | 3078 bp |
|---|
| Protein Length | 1025 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641238356 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001503542 |
|---|
| Protein GI | 157963508 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.42345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG CTGAATATTC CATCACCCAC AAAGTCATTA GCTGGATGTT TGCTCTACTG
CTGCTCGTTG GCGGCAGCAT CTCATTCTTT AGCTTAGGCC AGCTGGAGTT TCCCGAATTT
ACCATTAAGC AGGCCCTAGT GGTGACAGCT TATCCCGGCG CTTCTCCTGA ACAGGTGGAA
GAGGAAGTGA CCTTGCCACT TGAGGATGCG CTGCAACAAC TCGATGGCAT CAAGCATATC
ACTTCAGTAA ACAGTGCCGG TCTATCGCAG ATAGAGATTG AGATCAAAGA GAATTATGAC
GCCAGCGAAC TGCCACAAGT GTGGGATGAG GTGCGCCGTA AGATCAACGA CAAGGCCGTC
GAGTTACCGC CAGGGGTACA TGCTCCGTCT GTTATCGACG ACTTTGGCGA TGTTTATGGC
ATCTTGCTCA ATGTCAGTGG TGACGGCTAC AGCGACCGAG AGTTACAAAA CTACGCCGAC
TTCTTACGTC GTGAACTCGT GCTGGTCGAT GGTATCAAGA AGGTCACCAT AGCAGGCATA
GTCAACGAAC AAGTAGTGGT GGAGATCTCT CAGCAAAAAC TCAACGCCTT AGGCTTAGAT
CAAAACTATA TCTATGGCCT TATCAACAGC CAAAATGTGG TCTCTAACGC CGGTAGCATG
TTGGTGGGTG ATAACCGTAT TCGTATTCAC CCAACCGGTG AGTTTGATAA TGTACGCCAG
ATGGAGCGCC TGATCATCAG CCCTCCTGGC AGTGCAAAGC TTATCTATCT TGGTGATATA
GCCAAGATCT ACAAAGACAC CGAAGAAACG CCATCGAACA TCTATCACGC CAGTGGTAAT
AAGGCGCTAT CTATCGGCAT CGCCTTCTCT AGCGGCGTTA ACGTGGTTAA GGTCGGTGAA
GCGGTCAATG AACGCATGAG TGAGCTTAAC AGCGAATTGC CTATCGGTAT GGCACTGGAT
ACCGTTTACG ATCAAAGCAA GATGGTGGAC CAGACGGTCA ATGGCTTTCT GGTTAATCTG
GCCGAGTCGA TTGCGATCGT TATTGGAGTA CTACTTGTCT TTATGGGTGT TCGTTCTGGC
CTATTGATGG GCTTAGTGCT GCTATTAACG ATTTTGGGTA CCTTCATAAT GATGAATGTG
CTCAACATCG AGCTGCAGAT CATCTCACTT GGCGCCCTGA TCATCGCCTT AGGTATGCTG
GTCGACAACG CTATCGTGGT GACCGAAGGG ATCTTAATCG GTATCAAGCG CGGCCAGACT
CGCTTAGAAA CCGCCAAACA GGTGATCTCA CAAACTCAGT GGCCACTGCT GGGCGCCACC
ATTATTGCCA TCATCGCCTT TGCCCCGATT GGTTTGTCGG ATAACGCCAC CGGGGAGTTT
TGTGCCTCCT TGTTCCAGGT ATTGTTGATC TCGCTGTTTA TCAGCTGGAT CACCGCCATG
ACCTTAACCC CGTTTTTCTG CAACCTGATG TTCAAAGATG GCATCGTTAG CGACGATGAA
AATGACGATC CCTATAAGGG CTGGCTATTT GGTCTTTATC GCCACAGTCT CAATTATGCC
ATGCGCTTTA GAGGCCTGAC ACTGACCTTA GTCGTTGCCG CGCTGATCAC ATCGGTTATC
GGATTTGGCT ATGTTAAGAA TGTCTTCTTC CCTGCATCGA ACACACCTAT GTTTTTTGTC
GATGTGTGGA TGCCAGAAGG ATCGGATATC AAGGCAACCG AAAGACTACT AAGCCGAATC
GAAACCGACC TACTCGAGCA GCAAAAGACG ACAGATACAG GTCTTGTAAA CCTAACTACT
GTCATTGGCC AAGGCGCACA GCGTTTCGTC CTCTCCTATG TACCGGAAAA AGGTTATAAG
GCTTACGGTC AGATCTTGTT AGAGATGACA GATCTGCAGG CGCTTAATAA ATATATGCGG
TTGCTTGAGC GAGAGCTCAG CCTTAAATTT CCCGAGGCGG AGTACCGTTT CAAGTATATG
GAAAACGGCC CAAGCCCAGC CGCTAAGATT GAGGCGCGCT TCTTTGGTGA AGATCCACAG
GTGTTACGTC AGCTAGCAGC GCAGGCTGAA ACCATCTTAA AAGCTGAGCC GACAGCCGTG
GGAGTAAGAC ACAACTGGCG TAATCAGGTG ACCTTAGTGC GTCCGCAGCT AGCGCAGGCA
CAAGCTCGTG AAACCGGGAT CAGCAAGCAA GATCTCGACA CCGCCCTGCT AACTAACTTT
AGTGGCCAGC AGATCGGCAC CTATCGTGAG AACAGCCATC TGCTGCCGAT CATTGCCCGA
GCCCCTGCCG AAGAGCGACT CGATGCCCAG AGCATCTGGA AACTGCAGGT GTGGAGTCGC
GATAACAATA CCTTTGTACC AGTTACTCAG GTGGTTTCTG ACTTTAGTAC CGAATGGGAG
GATCCCTTGA TTATGCGCCG TGATCGTAAG CGAGTGATCT CAGTGCTCGC CGATCCGATT
AACGGCGCAG ATGAAACCGC CGACTCAGTT TTTAGAAAGA TCAAGGCCGA TATCGAAGCG
ATCCCACTGC CTGCAGGTTA CGAGCTTGAA TGGGGCGGTG AATATGAAAC CTCAATGGAG
GCACAGGAGT CGGTATTTAG TTCTATTCCG CTAGGTTACT TGGCGATGTT CCTTATCACT
GTGTTGCTAT TTAACTCAGT TAGGCAGCCG CTAGTGATCT GGTTTACCGT TCCGTTAGCA
CTGATCGGTG TGGTATCTGG TCTATTGCTA TTCGATGCCC CCTTTAGCTT TATGGCGCTA
CTAGGACTGC TGAGCTTAAC GGGTATGATT ATCAAGAACG GTATCGTACT CGTGGATCAA
ATTAACCTCG AGCTATCCCA AGGCAAAGAA GCCTATCAGG CGGTTGTCGA CTCAGCCGTG
AGTCGCGTGC GACCTGTATT GATGGCCGCC ATTACGACTA TGCTAGGTAT GCTACCACTC
TTGTCTGATG CCTTTTTTGG ATCGATGGCG ATCACCATCA TCTTCGGCCT TGGATTTGCG
TCAGTACTAA CATTAATCGT TTTGCCGGTG ACCTACACCT TAGCCTTCAG AATTCCTTAC
TCAGGTAAGC ACAGCTAA
|
|---|
| Protein sequence | MNFAEYSITH KVISWMFALL LLVGGSISFF SLGQLEFPEF TIKQALVVTA YPGASPEQVE
EEVTLPLEDA LQQLDGIKHI TSVNSAGLSQ IEIEIKENYD ASELPQVWDE VRRKINDKAV
ELPPGVHAPS VIDDFGDVYG ILLNVSGDGY SDRELQNYAD FLRRELVLVD GIKKVTIAGI
VNEQVVVEIS QQKLNALGLD QNYIYGLINS QNVVSNAGSM LVGDNRIRIH PTGEFDNVRQ
MERLIISPPG SAKLIYLGDI AKIYKDTEET PSNIYHASGN KALSIGIAFS SGVNVVKVGE
AVNERMSELN SELPIGMALD TVYDQSKMVD QTVNGFLVNL AESIAIVIGV LLVFMGVRSG
LLMGLVLLLT ILGTFIMMNV LNIELQIISL GALIIALGML VDNAIVVTEG ILIGIKRGQT
RLETAKQVIS QTQWPLLGAT IIAIIAFAPI GLSDNATGEF CASLFQVLLI SLFISWITAM
TLTPFFCNLM FKDGIVSDDE NDDPYKGWLF GLYRHSLNYA MRFRGLTLTL VVAALITSVI
GFGYVKNVFF PASNTPMFFV DVWMPEGSDI KATERLLSRI ETDLLEQQKT TDTGLVNLTT
VIGQGAQRFV LSYVPEKGYK AYGQILLEMT DLQALNKYMR LLERELSLKF PEAEYRFKYM
ENGPSPAAKI EARFFGEDPQ VLRQLAAQAE TILKAEPTAV GVRHNWRNQV TLVRPQLAQA
QARETGISKQ DLDTALLTNF SGQQIGTYRE NSHLLPIIAR APAEERLDAQ SIWKLQVWSR
DNNTFVPVTQ VVSDFSTEWE DPLIMRRDRK RVISVLADPI NGADETADSV FRKIKADIEA
IPLPAGYELE WGGEYETSME AQESVFSSIP LGYLAMFLIT VLLFNSVRQP LVIWFTVPLA
LIGVVSGLLL FDAPFSFMAL LGLLSLTGMI IKNGIVLVDQ INLELSQGKE AYQAVVDSAV
SRVRPVLMAA ITTMLGMLPL LSDAFFGSMA ITIIFGLGFA SVLTLIVLPV TYTLAFRIPY
SGKHS
|
|---|
| |