| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3695 |
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| Symbol | |
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| ID | 5664080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4494740 |
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| End bp | 4495822 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238355 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001503541 |
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| Protein GI | 157963507 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.101272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC TGACAACTAC ACTTTCACTC CTTATCTTGA CTGCAGTCAT TTCAGGTTGT
AACGCAGAGT CTAGCGAGGC TGTAAAGCCT AGCGTGCGCC CAGTTAAACT GCTTGAAATC
ACCGATATCA ATGCGGGTTC GCTGCGAAGC TTCCCTGCAA AAGTTGCTGC CACTAAGCAA
GCAGAACTCG CCTTTCGGCT GTCGGGACAC TTAGTAGAGT TTAATCTTGT TGAAGGTCAA
CAGGTAAATA AAGGCGCCGT ATTAGCCCGC CTGGATAGAC GTGATTCGCA AAACACCCTG
CTTAACCGTG AGGCCGATTA TGAATTAGCT AAGGCCGACT TTAAGCGTAA GGGCGAGCTG
CTTCGCCGTG AGCTTATCTC ACAGGCCGAA TATGACTTAG CCTCGGCGCA GTTAAAGTCG
TCGAAAGCCA ACCTTGCCAG CGCCCAAGAT CAGCTCAGCT ATACCGAGTT AACCGCTCCC
TATGACGGCA CAGTCGCTAA GATCTCCATC GATAACTACC AGATGGTCCA AGCTAACCAG
CCAGTGCTAG TGCTACAAAA AGACAGCGAC ATAGATGTGG TGATCCAAGT GCCTGAATCC
CTTGCGAGCA AGGTGACTCA ATTTAATCCC AACGCCATTA CTCAACCTGT AGTGCGATTC
GCCAACGACC CAAGCAGCAG CTATGCCGCG CTATTAAAAG AGCATGCAAC CCAAGTGACC
CCTGGCACCC AGAGCTATGA AGTGGTGTTT ACCCTGCCCC GCCCTGCCAA TATGACAGTG
CTACCGGGTA TGAGCGCCGA GCTGACTATG GACATTACAC AGCACAATTC TCAAACCCTG
GCTGCGATTC TGCCTGCCAG TGCCATTAGT AAACGCGACC AAGATGGCCA AACGGTTGTC
TGGGCCTTTG ACAGTAAACT AGGCAAGGTA ACACAACAGA TGGTGACCTT AGGTAAGGTG
ACAACCGATG GCATTGAGAT TGTCGATGGC ATCAAGGTGG GTGACCAAGT GGTTGTGGCT
GGCGTGCAAT ATCTGTCTGA AGGGCTTGAG GTTAAGCCAC TGCGTTGGCA ACGAGGCGTG
TAG
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| Protein sequence | MKNLTTTLSL LILTAVISGC NAESSEAVKP SVRPVKLLEI TDINAGSLRS FPAKVAATKQ
AELAFRLSGH LVEFNLVEGQ QVNKGAVLAR LDRRDSQNTL LNREADYELA KADFKRKGEL
LRRELISQAE YDLASAQLKS SKANLASAQD QLSYTELTAP YDGTVAKISI DNYQMVQANQ
PVLVLQKDSD IDVVIQVPES LASKVTQFNP NAITQPVVRF ANDPSSSYAA LLKEHATQVT
PGTQSYEVVF TLPRPANMTV LPGMSAELTM DITQHNSQTL AAILPASAIS KRDQDGQTVV
WAFDSKLGKV TQQMVTLGKV TTDGIEIVDG IKVGDQVVVA GVQYLSEGLE VKPLRWQRGV
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